| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4118 |
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| Symbol | |
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| ID | 5735979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5265134 |
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| End bp | 5267992 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281272 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001546878 |
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| Protein GI | 159900631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAA TTGATTCGAT TCAGATTGTT GGCGCACGCC AGCATAATCT CAAAAATATT
GATTTAGCCA TTCCCAAAGG CAAATTGGTG GTATTCACCG GCCCATCGGG GGCTGGCAAA
TCAACACTCG CCTTTGATAC GATTTATGCT GAAGGCCAGC GTCGCTATGT TGAATCGCTT
TCGAGCTATG CCCGCCAATT TTTGGGTCAA TTGCCCCGAC CTGAAGTGGA TAGCATTCGT
GGTCTAGCGC CAGCAATTGC CGTCGCCCAA CAAACGATCA ACCGTTCGCC GCGCTCAACC
GTTGGCACAA TCACCGAAAT TTATGATCAT TTGCGCTTGT TGTATGCGCG GATTGGCAAA
CCGCATTGCC CAGTCTGTGG CCGTGCGATT GAGCAACAAA CTGCTAGCCA AATCGTCGAT
CAGATTTTGG GTTATCCTGA CGGCACACGC CTGATGATTT TAGCGCCCTT GGTGAATGAA
GAACTTGGTT CGCATGCCAC GGTGCTTGAG CAAACGCGAC GGGCTGGCTT TGTGCGGGTA
CGGGTTGATG GCGCAATTGT TGATCTTGAT GAACCAATTG AGTTGGATCA TCGTCAAGCC
CATAGCATAG ATGTGGTGGT CGATCGGCTG ATTATTCGCC ACAGCGAGGC CGTGAGCTTG
AATGACCATC CGGATCGGGT ACGGGTGAGC GATTCGGTTG AAACAGCCTT GAAAACTGGC
GCGGGAATGG TCTGGGTTCA GCCGCTTGAT GGTCAACAGC TGCGTTACAG CGAACATGCT
GCATGCCCTG AACATGGGCC ATTGGCCAGC GGCGCGATCG AACCACGCAG CTTTTCATTT
AATAGCCCAC ATGGTGCTTG CCCGATTTGC GATGGATTAG GCACAGTTGA TGATTTCGAC
CGGAACCTGT TACAATCTCA GGCAGCGCAA ACCCTTGGCG AACTGCTTTC GAATCCACTT
CGCGCCAGCA CCACGACCTA CCAACAATAT TGGGAAGAAA CCATCCAAGG TTTAGCTGAA
GCTTTGGGCA GCGATCTCGA ACAGCCTGTT GACACAATGG CTAGCTGGGC GTTAGATTTA
TGGCTAGAAG GCACAATTCC AAGCGATGAT CAACTACATT TAAGCAAAAA GCTACGCCAA
CAGCTCGCCA ACTGGTCAGG TTTGCTCGGT TGGTTGCGTC AACATTGGCA ACAAGCAAGC
GAACAACAGC GCGAAAGCCT CAGCATCTAT CGCCAAGGCA CCATTTGTTC GGCCTGTGAA
GGTTCGCGCT TGCGACCAGA GGCGCGGGCA GTTACACTAC AGGGGCTAGC AATCGATCAA
GTTACAGCAA TGTCGATTGA GGCTAGTTTT GCTTGGGTTA GTGAACTACC CAACAAATTG
CGGCGCGAGC GTGAGCAACA GATTGCAGCG CCGATTGTGC GTGAAATGTG CTTGCGTTTA
CAGTTCTTGC GCGAAGTTGG CCTAGACTAT TTGAGTTTGG CGCGAACTGC TGAGAGCCTA
TCGGGCGGCG AGGCTCAACG GATTCAATTG GCCACCCATA TTGGAGCTGG ATTATCAGGG
GTCTTGTATG TCTTGGATGA GCCATCGATT GGCTTGCATC CACGCGATAC TGAGCGTTTA
TTACAGACAT TATTGCAACT ACGCGACCTT CGCAATTCAG TTTTAGTAGT CGAGCATGAT
CCAGCGATTA TTGCTGCTGC TGATTGGGTG GTTGAAGTTG GGCCGACAGC GGGCGTGCAA
GGTGGCTATA TTATGGCCAG CGGCACGCTT GAGCAACTGA TAGCTCAGCC CAATTCCCAA
ACAGGCCAGT ATGTAGCTGG GCAACGGCAG CTAAGCCTGC CTCAAACACG GCGAAAGCCA
ACCCATGCTA CACTAATGCT ACGTGGAGCC AAACAGCATA ATCTCAAAGA TCTGGATGTA
GCGATTCCAT TGGGATGTTT GGTTGCGATT ACGGGAGTAT CAGGTTCGGG GAAATCGACA
CTTATTCATG AGATTCTCTA CCCACGGCTG GCCAACGAAC TGCATGGAAG CCGCCTGCCA
GTGGGCCGAC ATCGAAGCCT TGAAGGCTAT GATCAACTTG AAAAAGTGAT TGCAGTTGAT
CAAACGTCAC TGGGGCGCTC AGGTCGTTCC AACGCTGCCA CCTACACCGG TATTTTCGAC
GCATTGCGTC AATTGTTTGC TGGGACACCT GAAGCCAAAG CGCGGGGCTA TGGAGCCAGT
CGATTTTCCT TTAATCTTAA GGGAGGGCGG TGCGAACAAT GTCGCGGCGA AGGTGTGGTA
TCGATTGCCA TGCAATTTCT GCCAGATCTA GCGGTGACCT GCGACGCATG CGGCGGGTTG
CGTTATAATC GAGAAACCCT TGATATTCGC TATCGTGGGT ATACCATTGC TGATGTGCTC
GCCATGACCG TAGGCCAAGC CTTAAGCGTT TTTGAACGGC TACCGGCTTT GGCGCGAAAA
CTAGAGAGTT TGGTTGAGGT CGGGTTAAGC TATTTGACGT TAGGGCAGCC AGCGGCGACT
CTTTCGGGAG GCGAAGCGCA ACGGGTAAAA CTGGCGGCAG AGCTAGCGCG TCGAGGAACA
GGCCGAACCC TGTACATCCT TGATGAACCA ACCACCGGAT TATATTGGAC GGATGTCGAA
CGGTTAATTG CGATATTGCA ACGATTGGTT GATACAGGAA ACAGCGTTGT GGTGATCGAA
CATCATCTCG ACCTGATCAA GACCGCCGAT TGGGTGATCG ATTTAGGGCC GGAAGGTGGG
GACACTGGTG GCCGGCTGGT AGTGGCTGGT ACGCCGGAAG TAGTCGCTAT GAATCAAGCT
TCATGGACTG GCCGCTTCCT TCAAACCGTG TTAGCTTGA
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| Protein sequence | MAEIDSIQIV GARQHNLKNI DLAIPKGKLV VFTGPSGAGK STLAFDTIYA EGQRRYVESL
SSYARQFLGQ LPRPEVDSIR GLAPAIAVAQ QTINRSPRST VGTITEIYDH LRLLYARIGK
PHCPVCGRAI EQQTASQIVD QILGYPDGTR LMILAPLVNE ELGSHATVLE QTRRAGFVRV
RVDGAIVDLD EPIELDHRQA HSIDVVVDRL IIRHSEAVSL NDHPDRVRVS DSVETALKTG
AGMVWVQPLD GQQLRYSEHA ACPEHGPLAS GAIEPRSFSF NSPHGACPIC DGLGTVDDFD
RNLLQSQAAQ TLGELLSNPL RASTTTYQQY WEETIQGLAE ALGSDLEQPV DTMASWALDL
WLEGTIPSDD QLHLSKKLRQ QLANWSGLLG WLRQHWQQAS EQQRESLSIY RQGTICSACE
GSRLRPEARA VTLQGLAIDQ VTAMSIEASF AWVSELPNKL RREREQQIAA PIVREMCLRL
QFLREVGLDY LSLARTAESL SGGEAQRIQL ATHIGAGLSG VLYVLDEPSI GLHPRDTERL
LQTLLQLRDL RNSVLVVEHD PAIIAAADWV VEVGPTAGVQ GGYIMASGTL EQLIAQPNSQ
TGQYVAGQRQ LSLPQTRRKP THATLMLRGA KQHNLKDLDV AIPLGCLVAI TGVSGSGKST
LIHEILYPRL ANELHGSRLP VGRHRSLEGY DQLEKVIAVD QTSLGRSGRS NAATYTGIFD
ALRQLFAGTP EAKARGYGAS RFSFNLKGGR CEQCRGEGVV SIAMQFLPDL AVTCDACGGL
RYNRETLDIR YRGYTIADVL AMTVGQALSV FERLPALARK LESLVEVGLS YLTLGQPAAT
LSGGEAQRVK LAAELARRGT GRTLYILDEP TTGLYWTDVE RLIAILQRLV DTGNSVVVIE
HHLDLIKTAD WVIDLGPEGG DTGGRLVVAG TPEVVAMNQA SWTGRFLQTV LA
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