Gene Haur_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4094 
Symbol 
ID5735953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5226296 
End bp5226637 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID641281246 
Productanti-sigma-factor antagonist 
Protein accessionYP_001546854 
Protein GI159900607 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.216388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC TGATCCAAGA AACCAATGGT AAGGTCTTGA TCGTGCGTTT GCCTGCTCGC 
ATGGACGCTG CGGCTGTTCG TGAGCTCGAA GAACCATTTG CTCAATCGAT TGCTGATCAC
AATGGGCCTG TATTGGTCGA TGTAAGCAAA GTCGATTTTG CGGCAAGCTT GGCCTTGCGC
ATGCTCATGA TGAATTTGAA AGATCAGCAA AATCGCGGGC AAAATTTGAT GCTGTTTGGC
TTGCAAACCC AAATTGCTGA GGTTTTCCGC AAAACCCGTT TCGATACGCT GTTTACAATT
GCCGACGACG AAGCCAGCGG CATTGAGCAA CTGAGCGCCT AA
 
Protein sequence
MAELIQETNG KVLIVRLPAR MDAAAVRELE EPFAQSIADH NGPVLVDVSK VDFAASLALR 
MLMMNLKDQQ NRGQNLMLFG LQTQIAEVFR KTRFDTLFTI ADDEASGIEQ LSA