Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4024 |
Symbol | |
ID | 5735885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5135588 |
End bp | 5137231 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641281174 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001546784 |
Protein GI | 159900537 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.411315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCAAT TTGATGCGAT TGTGGTTGGC GGTGGGCATA ATGGCTTGAC CTGTGCCTGC TATTTGCAAA AGGCCGGAAT CAAAACCCTA GTGATCGAAC GACGAGCGAT CGTCGGCGGC GCAGTTTGCA CCGAAACCAT GTTTGGTGGC TATAAGATGG ATGTTGGCTC ATCGGCCCAC ATTATGATTC ACCTGACTCC TGTAGTGCGT GAGCTTGAAC TGCACAAATT TGGGCTTGAA TATATTGATA TGGACCCATT TGCTTGGTAT CCATTGCCCG ATGGCTCGGG GGCAATTGAA TTTTGGCGTG ATTTAGACAA GACGTGTGCT TCGATTGAGA AAATTTCACC CAAGGATGCC CATGCTTATC GCCAATTTGT GGCGTTGTGG GGGCCGCTCA ATGAAGGGGT TTTCGATGTA TTTCTCAAAG CACCTTCGCC TGCCAACTTA GGCCGCCAAA TGCTAACGGG CCAATTCAAA GGCGAAAAAG GCACGCATCC GCTGGATATT CTGCGGCGCT TGTTTACCTC GTATGGACAT TTGATCAACG AAACCTTTGA GAGCGAAGCA ATGCGGGCAG CAATGGGATG GCTAGCAGCG CAATCTGGCC CACCACCGCA CGAAATTGGC ACCGGCGATT TTGCGGGCTG GCACGCGATG CTGCATGAAA GTGGCGCGAA ACATCCGCGT GGTGGTTCGG GCATGTTGAC CCAAGCCATG GCGGCACGCT TCAAAAGTGA TGGCGGTACG CTGCTGCTTG ATGCCCCAGT TGAACGGATT GTGGTGCAAA ACGGCGTAGT GCACGGCGTA CAATTAACCT CGGGCGAAAC TTACACCGCA CCAACGGTTA TTTCCAATGC CCATGTGCAA ACCACCTTAT TAAAACTGGT TGAGCCTGAG CAACTGCCAA ATGGTCTGGT CGAGCGGGTT GGCCGCATTC GCGTTGGCAA TGGCTTTGGG ATGGCGGTGC GCTGTGCTGC CGATGAATTG CCCGATTATC TGGCTGCGCC TTCTGGTGGT CGCCCGCATC CTTCACATCA TGGGTTGCAA TTGCTTTGCC CTTCGATCGA CTACCTGAAT CGCGCGGTTA GCGATTATGA TCGCGGCGTG CCAGCGACCG ATCCAGCGGT AATTGCCATG ACATTTAGTG CAATCGACCC CGATGTTGCA CCCAAGGGCA AGCATACGCT GTTTTTGTGG GGTCAATATC ATCCGTATCA ATTAAGTAAT GGCGAAGATT GGGATAGCAT TGCCGAGCGC GAGGCCGACA AATTACTCGA AGTCGTGTAT CGTTATGCCC CCAATATGCG TGGCAAAATT AGCAACCGCT ATGTGCAAAC TCCCTTAACC TTGGAGCGCA CCTTTGGCAT GTTGCGTGGT AATGTGATGC ATGTCGAAAT GTCGTTCGAT CAGATGTTTG CCTTCCGCCC GCTGCCTGAG CTTTCCGAAT ACCGCGTGGC GGGAATTAAG GGCTTATATT TGACCGGAGC CAGCACCCAT CCTGGTGGCG GCGTATTTGC GGCCTCAGGT TACAACACCG CCCAAACCGT GCTCAAAGAT CAGCAGCCAT CACGTCAATG GGTTGGCTGG ACGCTCGGGG CGGCTGCCGC TTTAGGTGTG GTGGCTTGGG CCAAGAAGAA GTAA
|
Protein sequence | MAQFDAIVVG GGHNGLTCAC YLQKAGIKTL VIERRAIVGG AVCTETMFGG YKMDVGSSAH IMIHLTPVVR ELELHKFGLE YIDMDPFAWY PLPDGSGAIE FWRDLDKTCA SIEKISPKDA HAYRQFVALW GPLNEGVFDV FLKAPSPANL GRQMLTGQFK GEKGTHPLDI LRRLFTSYGH LINETFESEA MRAAMGWLAA QSGPPPHEIG TGDFAGWHAM LHESGAKHPR GGSGMLTQAM AARFKSDGGT LLLDAPVERI VVQNGVVHGV QLTSGETYTA PTVISNAHVQ TTLLKLVEPE QLPNGLVERV GRIRVGNGFG MAVRCAADEL PDYLAAPSGG RPHPSHHGLQ LLCPSIDYLN RAVSDYDRGV PATDPAVIAM TFSAIDPDVA PKGKHTLFLW GQYHPYQLSN GEDWDSIAER EADKLLEVVY RYAPNMRGKI SNRYVQTPLT LERTFGMLRG NVMHVEMSFD QMFAFRPLPE LSEYRVAGIK GLYLTGASTH PGGGVFAASG YNTAQTVLKD QQPSRQWVGW TLGAAAALGV VAWAKKK
|
| |