Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3949 |
Symbol | |
ID | 5735811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4954270 |
End bp | 4955100 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641281101 |
Product | TnsA endonuclease |
Protein accession | YP_001546711 |
Protein GI | 159900464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA GGCGAAGAGC CACAACACAT GAATCCATCC AGAAGCTCAT TGCAGCAGGC CGTGGGCAAA ACGAAGGACG GAAATATAAG CCTTGGTTGA CTATTCAGGA TGTACCGTCT AATGGTCTAG TCCATCGAAT TAAAGGAAGT AAACATGGAC GTGTGCATCA TTTAATGAGC AATTTGGAGC GTGACTACTT TTACTTACTT GATTGGGCTG ACGATGTTAT TGATATTCGC GAACAGTATC CCCTTCTGCC TATCGAGGAA ACACAGAATA TTGCAAAATC ATGCAGCATA AAGCATCCAC GCGATCCTGC AACGAAACAT GACATTGTGA TGACTACCGA CTTTGTTATT ACCATGGAGA GAGATGGAAA ACGCTGGATT CAAGCCCGAA CCGTAAAACC ATCAGAGAAG CTACGTTCCC AGCGAGTTCT CGAGAAGTTT GAGATCGAAC GGAAATATTG GGAAACACGA GGAATTAACT GGGGAATTGT CACCGAGTTG GATATTCCAT CCGTCACAGT TCGCAATATC GATGTGTTGC GACTTTATCG GACGATAACA GATCGTGGCC TTTCAGGCAC GGAAATTCAG TCTATTGCCG ATTACTTACG CCGCAATTTG CGGAATGCAT TGTTTACATT GGCGCAAATT ACTACTGAAT GTGATGCTGC GATGAGAGTT CGTCCAGGTA GTAGCCTCGT CGTTGCGTAT CATTTGATTG CAACGCGTAA ATGGATAATT GATCTCCACC GTCCGTTTAA TCCCACAGAA CTTTTTATAC TCCAAGAACG AAAGGACTCC TATGGATCTC TGCCTAAATA G
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Protein sequence | MAKRRRATTH ESIQKLIAAG RGQNEGRKYK PWLTIQDVPS NGLVHRIKGS KHGRVHHLMS NLERDYFYLL DWADDVIDIR EQYPLLPIEE TQNIAKSCSI KHPRDPATKH DIVMTTDFVI TMERDGKRWI QARTVKPSEK LRSQRVLEKF EIERKYWETR GINWGIVTEL DIPSVTVRNI DVLRLYRTIT DRGLSGTEIQ SIADYLRRNL RNALFTLAQI TTECDAAMRV RPGSSLVVAY HLIATRKWII DLHRPFNPTE LFILQERKDS YGSLPK
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