Gene Haur_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3949 
Symbol 
ID5735811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4954270 
End bp4955100 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content44% 
IMG OID641281101 
ProductTnsA endonuclease 
Protein accessionYP_001546711 
Protein GI159900464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA GGCGAAGAGC CACAACACAT GAATCCATCC AGAAGCTCAT TGCAGCAGGC 
CGTGGGCAAA ACGAAGGACG GAAATATAAG CCTTGGTTGA CTATTCAGGA TGTACCGTCT
AATGGTCTAG TCCATCGAAT TAAAGGAAGT AAACATGGAC GTGTGCATCA TTTAATGAGC
AATTTGGAGC GTGACTACTT TTACTTACTT GATTGGGCTG ACGATGTTAT TGATATTCGC
GAACAGTATC CCCTTCTGCC TATCGAGGAA ACACAGAATA TTGCAAAATC ATGCAGCATA
AAGCATCCAC GCGATCCTGC AACGAAACAT GACATTGTGA TGACTACCGA CTTTGTTATT
ACCATGGAGA GAGATGGAAA ACGCTGGATT CAAGCCCGAA CCGTAAAACC ATCAGAGAAG
CTACGTTCCC AGCGAGTTCT CGAGAAGTTT GAGATCGAAC GGAAATATTG GGAAACACGA
GGAATTAACT GGGGAATTGT CACCGAGTTG GATATTCCAT CCGTCACAGT TCGCAATATC
GATGTGTTGC GACTTTATCG GACGATAACA GATCGTGGCC TTTCAGGCAC GGAAATTCAG
TCTATTGCCG ATTACTTACG CCGCAATTTG CGGAATGCAT TGTTTACATT GGCGCAAATT
ACTACTGAAT GTGATGCTGC GATGAGAGTT CGTCCAGGTA GTAGCCTCGT CGTTGCGTAT
CATTTGATTG CAACGCGTAA ATGGATAATT GATCTCCACC GTCCGTTTAA TCCCACAGAA
CTTTTTATAC TCCAAGAACG AAAGGACTCC TATGGATCTC TGCCTAAATA G
 
Protein sequence
MAKRRRATTH ESIQKLIAAG RGQNEGRKYK PWLTIQDVPS NGLVHRIKGS KHGRVHHLMS 
NLERDYFYLL DWADDVIDIR EQYPLLPIEE TQNIAKSCSI KHPRDPATKH DIVMTTDFVI
TMERDGKRWI QARTVKPSEK LRSQRVLEKF EIERKYWETR GINWGIVTEL DIPSVTVRNI
DVLRLYRTIT DRGLSGTEIQ SIADYLRRNL RNALFTLAQI TTECDAAMRV RPGSSLVVAY
HLIATRKWII DLHRPFNPTE LFILQERKDS YGSLPK