| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3885 |
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| Symbol | |
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| ID | 5735746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4878350 |
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| End bp | 4879795 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641281036 |
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| Product | trigger factor domain-containing protein |
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| Protein accession | YP_001546647 |
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| Protein GI | 159900400 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000588775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGTCA CAACTGAACA ATTACCAAAG CGCATTGTTG CGCTTGAGAT CGAGCCAGAC
GCAGCGACGA TAGAAAAAGA ATTGAACAAG GCCGCGCAAC GGATTGCCAG CAAGGTTGCC
ATTCCAGGCT TCCGCAAAGG TAAAGCTCCT CGCTTTATCG TTGAAAACTA CTATGGCAAG
GCCGCAATTT TAGAAGAAGC GACCGACGAA ATTATCAATG TAGCCTTCCG CGCTGCACTC
GAACAAGAAA ATATCAAGCC AGTCGCTCAA GCTTCCTTAG AAAAATTAGA GCCAGAGCCA
TTCCGCTTCC GTATCTTGGT TCCGGTTGAG CCAGAAGTGA TCTTGCCCGA TTACAAGGCG
ATCACGGTTG ATCTCACCGA AGAACCAGTT ACCGATGCAA CCTTGGAAGT TGCCTTGGAT
CAAGCTCGTG AAAAACACGT CGTTTTGAGC GCTCCCGAAG GCGAGCCAGA AGCCGCTGAA
GGCGATCAAC TCACCGCAAC CGTCCAAACC TTGGTCGATG GTGTGCCTTT GCATAAACTC
GACGAAGAGG ATGATGACGA TGATGACGAT GACGACGACG ATGATGATGA CGACGACGAT
GATGATGATG ATGATGACGA TGATGACGAT GACGATGACG ATGATGACGA CGACGACGAT
GACGATGATG ACGACGATGA CGACGATGAC GATGATGAAG GCGAACCAAC GACCTTAATC
ATGGAAGAAC GCCGCATCGT GCCTGAACTG TATGCAGGCT TGAAAGGCAT CAAAGCTGGT
GAAACTCGCG AAATCAGCGC TCACCTGCCA GCCGATCATC CAGATGCACG GGTTGCCGAT
AAAGATGTTG TATTCAAAGT AACTGTCAGC GAAATTCAAA ATCGCCAATT GCCAGCATGG
GAAGAACTCC CAGGTTTGGA AGAATTTGAA GGCGATTTGG ATGCCTACAA GGCTGACCTC
ATGGAGCGTT TGGTCAAGAA TTCAGGCGAT CACCATCGCC GCAATGTCTT GAACCAATAC
CTCGAAGAAG TTGTCGCTGC AACCAGCTTC GATGTGCCCG ATGCCTTGAT TGCTGAACGC
GCCCACGAAT TGCTCCACGA GCAAGTTGAA TCGTTGGCTC GCTATGGCAT CAACATGGAG
CAATACCTGC AAATCGTTGG CAAAACCCAC GACGAAGCAG TCCAAGAATT GTTGCCCCGT
GGCGAAGAAA GCTTGAAATC ATCGTTGGTT GTGCGCAAAA TCGTTGAAGC CGAAGGCTTG
AGCGTTGACG AAAGCGAAAT CAATGCTGAA ATCGAACGCA TCTTGAACGA TTTCCCTGAT
GCCCAACGTG GCCCAGCCCG CCGCCGCCTC GAAAAAGAAT TGCGGCCTCA AGTTGCTGGC
TCGTTGCTCG ACAAGAAATT GCAAGATCGC TTGGTCGAAT TGGCAACTGG CAACGCCGCT
GCCTAA
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| Protein sequence | MKVTTEQLPK RIVALEIEPD AATIEKELNK AAQRIASKVA IPGFRKGKAP RFIVENYYGK
AAILEEATDE IINVAFRAAL EQENIKPVAQ ASLEKLEPEP FRFRILVPVE PEVILPDYKA
ITVDLTEEPV TDATLEVALD QAREKHVVLS APEGEPEAAE GDQLTATVQT LVDGVPLHKL
DEEDDDDDDD DDDDDDDDDD DDDDDDDDDD DDDDDDDDDD DDDDDDDDDD DDEGEPTTLI
MEERRIVPEL YAGLKGIKAG ETREISAHLP ADHPDARVAD KDVVFKVTVS EIQNRQLPAW
EELPGLEEFE GDLDAYKADL MERLVKNSGD HHRRNVLNQY LEEVVAATSF DVPDALIAER
AHELLHEQVE SLARYGINME QYLQIVGKTH DEAVQELLPR GEESLKSSLV VRKIVEAEGL
SVDESEINAE IERILNDFPD AQRGPARRRL EKELRPQVAG SLLDKKLQDR LVELATGNAA
A
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