| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3868 |
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| Symbol | |
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| ID | 5735717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4860648 |
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| End bp | 4862906 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281019 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001546630 |
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| Protein GI | 159900383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCGCA ATTGCCCTAT CAGTGCGAGA TGTTGTATGT ATTACGAATA TCAGCATGAG
CAAAATTTGG TTGTGAGCAC TGCCGAAATG GAGCTTGGGT TTTCGACCTC AACAGGCATG
CTCACCTTGC TGCGTCGCCC TAACCAAGCC AACATTTTGA ATATCGGTAG CATTGGCATG
TCGGTCGATG TGCAATTAGC CGATGGTTGG GTCAGCGAAA CTCATTTTCC CCGCTATTTA
AGCCATCATG GCCGTGAAGT TGACGGCGTA ACTGAATTGA CGATCAACAT TGGCTTGGGC
TTTTTGCGCA TCAGCGATAG CTTGCAAATT ACTGGAACCT TGATTCGGCG TTCGGTCGCT
GTGACCAACA GTGGCGGCAA CGAGGCGCGG GTACATTGGG TGCGGTTGAG TTGGCCCTAT
GCGCGGGTTG GCAGTTATAG CGAAGCTCGG TTTGAAGCAC CTAGCAATAG TTTTCGGCCA
CGGCTGGATA TTGCCGCAGT TTCAAAATTG CGGCGTGGTA CATTGCCGAC GCAAACGATT
GCCCCAGCCA TTCGCCGTGG ACGCTTATTT GAAAATGCAC CAGATCGTGG ACCCGGGTTA
TTAGCCTTGC ACAGCACCAG CGAGAGCGAT AATTTGCTGT GTTGGTATTG GAGTAAAAGC
CAATCGGCTT GGCCCGATAT TGATGGCAAC GATTTGGCAT TAACGGTCGG CCACGAGCTT
GAAATTGCTG GCTGGCTCGC GCCCGATGCC ACGCTGAGCG GCGGCACGCA ATATTGTATG
TTGGTGCATG GCAATTGGTA CGATGCGATG CATGCCTTTC ATAACACCTG GCCTGTGCTG
GGAGTGCAGA CCTTGCCCGA TGTGCCCGAT TGGGTTTGCG CCGCCAATAT TTATGAAACG
CACGTTGGTT TATGGGGTGG CTTTGCCAAA TTTAGCCAAG AGCTAACCCG TTTGCGCGAT
TTGGGCTTCG ATACGATTAA TCTCATGCCA ATTTGGCGCT ATCACAATCT TTCGGACCAG
CCGTGGGATA TGAACTGGCA GGCTTCTGGT TCGCCCTACG CGATCGAAGA TTTTGAGCAG
CTGGAGCCTA GCTTGGGCAC TGCCGAAGAA TTTAAGGTCT TGGTTGAGCA AGCGCACGCC
TTGGGCATGC GAATTTTATG CGATCTGGTG GTGCAAGGTT GCTCGCGCAC TGCCCGCTAT
GTGCAAGAGC GGCCAGGCTG GTTTTGTCGC GATGAGCGGG GGCGCTTGGT TTCATCGCAC
GGTTGGAACG ATACCTACAG CTTTGATTGG GCGAATCCTG AAGTGCAAGA TTTCTATGTT
GATTGGACGA CTCGTTTTGC CCAAACCTAT CAGATTGATG GCTGGCGAGT TGATGCCCCA
CATCGCAAGG AGCCAAATTG GGATCGGCGC TTGGAGCGGA TGGCTGCTAG CACCTCATTT
GGCGTATTGA CGATTGTTGA GCGCATGCGC CAAGCCTTGC GCCAAATCAA CCCGCAAGCA
GCATTATTGT GTGAATTGTA TGGCCCGTTG TTTCCAATTA ATCACGATTT TGCCTACGAT
TATCTGGCGC ATTTGATGTT TTTCCACGCT GGCTTGGGCG TGCTCTCGCC CTACGAATTG
GGCGAATGGC TCGAAGATCA CTTTTTGGCT TTGCCCAAGG GAGCAATTCG AGTTTGCTTT
ACTGAAACCC ACGATACCCG CGATGTCAAC CCGATTGCCG ATGCCGTGCG AGGTTCGCGT
TTGGCGCGGT TGCTGCTGAC TGGCATGGTT GGCTGTGGCT TTGTGCCAAT GCTTTGGACG
GGACAGGAAG TGGGACAGGA AGCCTGGCTC AAACAATTAT TCAGCATTCG TGCCAACTAC
CCAATTTTGC GTTATGGCAA ACAACTGTTT AACGTCATGC CCTGCGATAT GCCCTCAGTT
TGGAGCGTGC TACGGGTTTG GCACGAAGAA CGCTTGGCGG TGGTGCTGAA TATGGGGCCA
CATCGGCGCA CTGCCACCCT GAGCATGCCC GTTGATCGTA TGCACATGGT CGAAGGTGAC
TATCATTTGT TTGATTTAGT GCGCGGCCAA GCAGTCGAAT ACGCTGGGCG CAACACTTGG
CGACGTGATG ATTTGTTGAA TTTGACCTTG ATTTTAGAGC CATTCGATAG TCTGCTGCTG
CATATTCGAG CTGGTACGCC GCCCCAATCA GAGCCTGCCA AGGCTGAGCC AGTTGCCGCC
GCTGCACCAG CAACCACGAG CCGACGACGG AATCGATAA
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| Protein sequence | MGRNCPISAR CCMYYEYQHE QNLVVSTAEM ELGFSTSTGM LTLLRRPNQA NILNIGSIGM
SVDVQLADGW VSETHFPRYL SHHGREVDGV TELTINIGLG FLRISDSLQI TGTLIRRSVA
VTNSGGNEAR VHWVRLSWPY ARVGSYSEAR FEAPSNSFRP RLDIAAVSKL RRGTLPTQTI
APAIRRGRLF ENAPDRGPGL LALHSTSESD NLLCWYWSKS QSAWPDIDGN DLALTVGHEL
EIAGWLAPDA TLSGGTQYCM LVHGNWYDAM HAFHNTWPVL GVQTLPDVPD WVCAANIYET
HVGLWGGFAK FSQELTRLRD LGFDTINLMP IWRYHNLSDQ PWDMNWQASG SPYAIEDFEQ
LEPSLGTAEE FKVLVEQAHA LGMRILCDLV VQGCSRTARY VQERPGWFCR DERGRLVSSH
GWNDTYSFDW ANPEVQDFYV DWTTRFAQTY QIDGWRVDAP HRKEPNWDRR LERMAASTSF
GVLTIVERMR QALRQINPQA ALLCELYGPL FPINHDFAYD YLAHLMFFHA GLGVLSPYEL
GEWLEDHFLA LPKGAIRVCF TETHDTRDVN PIADAVRGSR LARLLLTGMV GCGFVPMLWT
GQEVGQEAWL KQLFSIRANY PILRYGKQLF NVMPCDMPSV WSVLRVWHEE RLAVVLNMGP
HRRTATLSMP VDRMHMVEGD YHLFDLVRGQ AVEYAGRNTW RRDDLLNLTL ILEPFDSLLL
HIRAGTPPQS EPAKAEPVAA AAPATTSRRR NR
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