| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3523 |
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| Symbol | |
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| ID | 5735384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4436121 |
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| End bp | 4436987 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280670 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001546287 |
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| Protein GI | 159900040 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATG ATGATATTCC AGTAGGCCGA ATTTTAAGCC GCCGCGAGGC GCTCAAGCTT
TTTTCAGCGG TTGGCGCAGG CATGATGTTG GCCGCCTGTG GGAGCCAAAA CTCAACTGCG
ACCACCGCAC CAGCAGCCAC CGCCACAACT GGTACAAGTG CCGCAACCGC CATACCAACT
GCAACGACTG CCGCAACCAG CATTGCCAGT TTGCCATCGT GTGTGGTCAA ACCAGAGATG
ACAGTTGGGC CATATTTTGT CGATGAGCAA CTCAATCGCT CGGATATTCG CAGCGAGCCA
TCGGATAATT CGCTACGGGC GGGCGTGCCG CTGACCCTCA ATATCAACGT TTCACAAATT
AGCAGCAGCG CTTGTACGGC CTTGGCAGGG GCGATGGTCG ATATTTGGCA ATGCGATGCA
GAAGGAATTT ATTCGGGGGT GACTGATGCA GGCTTTCAAA CTGAGGGCTT AAAGTTTTTG
CGCGGCTACC AAATAACCGA TTCTAATGGC GATGCCAGCT TTACCACGAT TTTCCCAGGC
TGGTATCAAG GGCGCACCGT GCATATTCAT GTCAAAATTC GCACCACCAG CAACACCAAC
GAAGCCTATG AATTTACCTC GCAATTTTAT TTCGATACCG CCTTGACCAA TGAAATTTTG
GCGAATGCAC CCTACAAAGC TGGGAGCCAA CGCGACACCA CCAACGAAAA CGATATGCAC
TACGCCAATG GTGGCGAGCA AATGCTGCTT AGCTTAACCA AAACCAACGA TGGCTACACC
GCTGGCTTTC CAATCGCGCT CGATTTGAGC GACGCTGAAA CTGGCCAAGC TGATCGGTTT
GAGCAAATGC AAGCGCCGCC ACGCTAG
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| Protein sequence | MDNDDIPVGR ILSRREALKL FSAVGAGMML AACGSQNSTA TTAPAATATT GTSAATAIPT
ATTAATSIAS LPSCVVKPEM TVGPYFVDEQ LNRSDIRSEP SDNSLRAGVP LTLNINVSQI
SSSACTALAG AMVDIWQCDA EGIYSGVTDA GFQTEGLKFL RGYQITDSNG DASFTTIFPG
WYQGRTVHIH VKIRTTSNTN EAYEFTSQFY FDTALTNEIL ANAPYKAGSQ RDTTNENDMH
YANGGEQMLL SLTKTNDGYT AGFPIALDLS DAETGQADRF EQMQAPPR
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