Gene Haur_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3493 
Symbol 
ID5735354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4399402 
End bp4400175 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content53% 
IMG OID641280640 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001546257 
Protein GI159900010 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTAG CAACCCATCA CCCCTATAAT CTGCAATTGC CCGAATTTGC TGGCCCTTTG 
GATTTGTTGT TGCGCTTGAT TGAGCGTGAA GAATTGGCGA TCACGGCAAT TTCGTTGGCA
GCGGTTGCCG ATCAATATCT GGCCCATGTG CGAGCCATTC CCGACCCCGA CCCTTTGACC
GTGGCCGATT TTCTTGCCTT GGCGGCCCAA TTATTGTTGA TTAAATCGCG GGCTTTGCTG
CCTCGACGCG AGCCACCACC CGCCCCGCCT GAAGAAGATG TGGCTGAGCA ACTGGCCCAG
CGTTTGCGCG AATATCAACA ATTTAAACAA GCTGCAACCC AATTGCGCGA ATGGGAAAGC
GCTGGTTTGC GCGTGTGGGA GCGGGTTGCG CTGCCACCCC AGCCCGATTT ACCAGCGCCC
CAAATTGCAA CCCATAAATT AAGTGCCTTG GTTAATGCCC TCTCGCGGCG TTTGAGCCTG
ATCGAGCGTG AAACTCCACC AATTGCCATC CCCAAGGCCA AAGTTATTAC AATTGCCGAA
ATGGCCGAGC TGATTGGCGA ACGTTTGTTG CGCCAACGCT ATGTCGCCTT CGACGATCTG
CTGAGCCTCG CGACGACTCG TAGCGAAGTG ATTGTGGCCC TTTGGACGAT TTTAGAGCTC
GCCAAACGTG AAATTATTAA TGTTGAACAG GATGATTTGT TTGAATTGAT CAATCTCTCG
CGCGGGGAGC GCTTCGGCGA AACACTGACT GAACAGATGA AGGATGAGGG ATGA
 
Protein sequence
MPLATHHPYN LQLPEFAGPL DLLLRLIERE ELAITAISLA AVADQYLAHV RAIPDPDPLT 
VADFLALAAQ LLLIKSRALL PRREPPPAPP EEDVAEQLAQ RLREYQQFKQ AATQLREWES
AGLRVWERVA LPPQPDLPAP QIATHKLSAL VNALSRRLSL IERETPPIAI PKAKVITIAE
MAELIGERLL RQRYVAFDDL LSLATTRSEV IVALWTILEL AKREIINVEQ DDLFELINLS
RGERFGETLT EQMKDEG