| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3452 |
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| Symbol | |
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| ID | 5735313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4340323 |
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| End bp | 4341567 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280599 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001546216 |
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| Protein GI | 159899969 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.527539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TTCACCTCGC AGATATTCAC ATTGGCATGG AAAATTATGG CCGAATCGAT
AGCACAACTG GCCTCAACAC CCGCTTGATC GATTATCTTG ATCGGTTTGC CGAGGCTTTG
CAGATTGGCA TCGAGCATGA TGTCGATTTG GTGCTGATTG CTGGCGATAT TTACAAAAAC
CGCACGCCCA ACCCAACCCA TCAACGTGAA TTTGCTCGTC GCCTGCGCAG TGTGCTCGAT
CGGGGCATTC CCGTATTTAT GTTGGTTGGC AATCACGATG TTTCAGCCGC CGCAGGCAAA
GCTCATTCGG TCGAAATTTT CGATACCCTC GCCATCGATG GGGTAACAAT TGCCGATCGG
CTTGGGATTC ATACGATCGA AACTCGCGCC GGTAGCATTC AAATTGTGGC CGTGCCATGG
ATCAGCCGCC ACGCCATTTT GACCAAAGAT GATATTCGTG AGTTGCCATT TGCTGAACTC
GAAGCTGAAT TATTGCGGCG GGTAGGGGCT TGGCTCGAAC AAGTGCCCGA GCGGTTGCGC
GGCGATTTAC CAGCGATCTT GACCTTTCAT GGCACTGTTT CCAATGCCAC CTATGGCGCT
GAACGCTCGG TCATGTTGGG CAATGATCTG ATTCTGCCGC CATCACTTTT GGCCCAGCCA
GGCATTCAAT ATGTCGCCTT GGGCCATATT CACCGCTATC AAGTGCTCAG CGAAAATCCC
CCAATGATCT ACCCTGGCTC GATTGAGCGC ATCGATTTTA GCGAGGAATC TGAGCAAAAA
CAAGTGGTAA TTGTTGAAAT TGAAAATAAT TGGGAAGATG CCAGCTATCA GCCAATTGCG
GTGCATCCGC GCCCATTCGT CACGATCAAA GTTGATGTAA CTGGCAGCAG CGACCCCATG
GAGCGGGTGG CCCAAGCGAT TAGCAAGCGC GATTTAAATG GCGCGGTGGT GCGTTTGTTA
ATTAGCGCTA CTGCTGAGCA ACGCCCACAG CTTGATGAGA CTGAACTGCG ACGCTTGCTC
GAGGCTGCCG AAACCCATGT GATCGCCAGC ATTGCGATTG AGGCCCAACG CAGCGAACGC
ACTCGCTATG CTGCGGTTGC CAGCGAATTG AATGAAGGAT TAACTCCACG CCGCGCCCTC
GAAATCTACC TTGAAAGCAG CAATATCAGC GCCACTCGCC GCGAACAGAT GCTCAAAGCC
GCCGATGACT TGATCAAAGC CGAACAAGCA CGTGAGCAAG CATGA
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| Protein sequence | MKILHLADIH IGMENYGRID STTGLNTRLI DYLDRFAEAL QIGIEHDVDL VLIAGDIYKN
RTPNPTHQRE FARRLRSVLD RGIPVFMLVG NHDVSAAAGK AHSVEIFDTL AIDGVTIADR
LGIHTIETRA GSIQIVAVPW ISRHAILTKD DIRELPFAEL EAELLRRVGA WLEQVPERLR
GDLPAILTFH GTVSNATYGA ERSVMLGNDL ILPPSLLAQP GIQYVALGHI HRYQVLSENP
PMIYPGSIER IDFSEESEQK QVVIVEIENN WEDASYQPIA VHPRPFVTIK VDVTGSSDPM
ERVAQAISKR DLNGAVVRLL ISATAEQRPQ LDETELRRLL EAAETHVIAS IAIEAQRSER
TRYAAVASEL NEGLTPRRAL EIYLESSNIS ATRREQMLKA ADDLIKAEQA REQA
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