Gene Haur_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3362 
Symbol 
ID5736904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp4240119 
End bp4241054 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content48% 
IMG OID641280509 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001546126 
Protein GI159899879 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.135741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA ATCGTTTTGC CTTTTTCAAA GGGGAAATTG TGCCGATTGC TGATGCCAAA 
GTCAGCGTGA TGAACCATGC CTTGAATTAT GGCACAGGCT GCTTTGAAGG CATTCGGGCT 
TATTGGAACG AAGCCGACGA GCAATTGTAT GTGTTTCATT TGCAAGCCCA CTACGAACGT 
TTGTTGCGTT CATGCAAAGT GCTGCAAATT CGCCTACCTT ACAGCGCCGA GCAATTGGTT 
GAGACCACGC TTGAATTATT GCGCCGTGAA GAATTTCGCA GCGATGTCTA TATTCGCCCG 
CTGGCCTACA AATCATTTGA AGGTATTGGC GTGCGCTTAC ACGATATTAG CGACGATTTT 
ACGATTTGGG CAATTCCCTT TGGCAAATAC ATCGAAAAAG AAGCTGGCTT GAAAGTTGGC 
ATCAGTTCAT GGCGACGGAT TGACGATAAT GCGATTCCGG CGCGTTTGAA AGCAACTGGC 
TCATATGTGA ATTCGGCTTT GGTCAAGAGC GAAGCCATGC AAAATGGCTT TGATGAAGGG 
ATTGTCTTGA CCCAAGATGG CCATGTTTGC GAAGGTAGCG CCGAAAATAT CTATGTGGTG 
CGCAATGGCG TGCTATACAC CCCTGGCATT ACCGATAACA TTCTTGAAGG CATCACCCGC 
CATGTGATCA AACAACTGGC AACAGAAGAG TTGGGCTTGC AAGTTGTTGA GCGTTCAATT 
GATCGCACCG AACTGTATGC TGCTGATGAA ATCTTCTTTT GTGGCACAGG GGTTGAAGTT 
ACTCCGGTAG TTGAGGTTGA TCATCGGGCA GTTGGCAATG GCCAAATTGG CCCGATCTTC 
AGCCAAATTT GCAGCTTGTA TTATGCTGTG ACCCATGGCC AAGATCCCAA GCGGCGTGAA 
TGGTGCAGCC CAGTCTATAA TTCAGTCTTA GCCTAA
 
Protein sequence
MSTNRFAFFK GEIVPIADAK VSVMNHALNY GTGCFEGIRA YWNEADEQLY VFHLQAHYER 
LLRSCKVLQI RLPYSAEQLV ETTLELLRRE EFRSDVYIRP LAYKSFEGIG VRLHDISDDF 
TIWAIPFGKY IEKEAGLKVG ISSWRRIDDN AIPARLKATG SYVNSALVKS EAMQNGFDEG 
IVLTQDGHVC EGSAENIYVV RNGVLYTPGI TDNILEGITR HVIKQLATEE LGLQVVERSI 
DRTELYAADE IFFCGTGVEV TPVVEVDHRA VGNGQIGPIF SQICSLYYAV THGQDPKRRE 
WCSPVYNSVL A