Gene Haur_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3319 
Symbol 
ID5735189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4183106 
End bp4184071 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID641280466 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001546083 
Protein GI159899836 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC AATTACCACC AACCCAGCCA CGCCAACCCC AACCATCGCA GGCGCGGCCC 
GAAGCAGCCC CACCACAAGT TGCCGATGCG CAATTACGTC AGTTGGTCGT AGCTTTAGAT
AACGTCAACG ATCCCAATCA TGAACGGGCC GAGGATGATC TGATTCGTTT GGGTGCGCAG
GCTGTGCCCT TGCTGATCGA TGCGCTTGAT CCACGTTACC CATGGTTACG AGCCTATCGC
GCTGCCGAAG CTCTCGGCCA AATTGGCGAT GGCCGCGCCA GTCGTCCCTT GAGCCAAGCC
TTAAATCATC CCAACAGCAA TGTGCGCTGG GCTGCCGTGC GAGCTTTGGG CAAAGTTGGT
GATGGTCGCG CCTTGTTGGC CTTACGCCGC ACTGCCCGCG ATGATCGTAG CCGCACCAGT
TGGGGCGAGC CTGTAGCTGC TAGTGCTGCT GCAACGTTGC GCGAAATGCA ACGTACCAGC
ACAATCCTGC GACTTTCCGA TCCCATTCGG ATTGCCTTGT TGGTTGCGGT AGCCTTCTTT
GCCTTGTTTT GGGCAAATGA TCGGATTACA ACAGTCCGCG GCGCAATCAA CGAGTCGAAT
CATGTAGTTT GGGGCACTGC CGTTACGCCA ATTTTGCCAA CCGCAACCCC AGTCAGCGAA
GATCTCAGTA GCGAAGATGA TCCTGAAGAG GATTTGGTTG AGGAAACGCC CACGGTTGAT
CCGGCGGCGA CCCCAACCTT GGCTCCGGCA ACTGCCACAG TGGTTGCACC AACCGCTAAT
GTTCGGCCAG CACCAAACAC CAATAACGAC CCAATCGCCC AGTTGAAAGC TGGCGATAGT
GTGCAAGTGC TTGGTCAATC TGGCGATTGG TATGAAATAC AGTTGCCCGA TGGAACTGGC
CGTGGTTGGG TGGCTTCAAG TGTGCTTGGC CCGCCAAGTG GGCCTGTGCC AACGGTTACT
AATTAA
 
Protein sequence
MTDQLPPTQP RQPQPSQARP EAAPPQVADA QLRQLVVALD NVNDPNHERA EDDLIRLGAQ 
AVPLLIDALD PRYPWLRAYR AAEALGQIGD GRASRPLSQA LNHPNSNVRW AAVRALGKVG
DGRALLALRR TARDDRSRTS WGEPVAASAA ATLREMQRTS TILRLSDPIR IALLVAVAFF
ALFWANDRIT TVRGAINESN HVVWGTAVTP ILPTATPVSE DLSSEDDPEE DLVEETPTVD
PAATPTLAPA TATVVAPTAN VRPAPNTNND PIAQLKAGDS VQVLGQSGDW YEIQLPDGTG
RGWVASSVLG PPSGPVPTVT N