| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3306 |
|---|
| Symbol | |
|---|
| ID | 5735176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4171352 |
|---|
| End bp | 4172215 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641280453 |
|---|
| Product | lysine biosynthesis enzyme LysX |
|---|
| Protein accession | YP_001546070 |
|---|
| Protein GI | 159899823 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family
[TIGR02144] Lysine biosynthesis enzyme LysX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTAG GTATGTTATG TTCCCGAATT CGGGTTGAAG AAAAGCTGCT GATCACTGAG
TTTGAGCGGC GCAATGTCCA ATTTGAGCGG ATTGATGATG ATCAGACATG GTTTGATTTG
AATGCTTTGC AAGCCAATCG CCAAGTGCGC GAACAATTTC CTGATGTGAT TATTGAGCGT
TCGTTGCACC ATGGCCGAGC GTTGTACACA CTCAAAACCT TGAACGATGC TGGCATTCCA
ACCGTCAATA ATTATGATGT GGCATTAACC TGTGGCGATA AATTTTTGAC TACCCAAGCC
TTATTATGCA ACGGCGTGCC ATCGCCCCGT TGTTTACTGG CTTACACTCA AGATTCAGCG
CTCGAAGCGA TTGAAAGTTT GGGCTATCCG GTAGTGTTGA AGCCAGTAAT TGGCTCGTGG
GGGCGCTTGG TCTCAAAGAT CAACGATCGC GAAGCTGCCG AGGCGGTGCT TGAGCATCGC
GATACCTTGG GCAATTATCA GCATGCCATT TTCTATATTC AAGAATATGT CAACAAACCA
GGTGGTCGCG ATATTCGGGC GTTTGTGGTT GGCGATGAGT GCATTGCGGC GATTTATCGC
ACCAGCGGAC ACTGGATCAC CAATACGGCT CGCGGCGGCC AAGCATCAAA CTGCCCAATC
ACGCCAGCCT TAGCCGATAT TTGTATTGGC GCGGCCAATG CAGTTGGTGG CGGCGTAGTT
GCAATCGATG TGTTCGAGAC TGCCGAAGGT CGTTATTTGG TCAATGAAGT CAATTACACC
ATGGAATTTC GCAACAGCAT CAGCACAACT GGAGTGAATA TTCCCGAACG AATTGTTGAT
TATGTGCTAG CTCAAGCGCA ATAG
|
|---|
| Protein sequence | MRVGMLCSRI RVEEKLLITE FERRNVQFER IDDDQTWFDL NALQANRQVR EQFPDVIIER
SLHHGRALYT LKTLNDAGIP TVNNYDVALT CGDKFLTTQA LLCNGVPSPR CLLAYTQDSA
LEAIESLGYP VVLKPVIGSW GRLVSKINDR EAAEAVLEHR DTLGNYQHAI FYIQEYVNKP
GGRDIRAFVV GDECIAAIYR TSGHWITNTA RGGQASNCPI TPALADICIG AANAVGGGVV
AIDVFETAEG RYLVNEVNYT MEFRNSISTT GVNIPERIVD YVLAQAQ
|
|---|
| |