| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3304 |
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| Symbol | |
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| ID | 5735174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4169928 |
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| End bp | 4170923 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641280451 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001546068 |
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| Protein GI | 159899821 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.652858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGGT TGTGTTTGAT TGCTGGCGAT GGGATTGGCC GCGAAGTGGT GCAAGCAGCC
CGCCAAGTGC TCGAAGCCTT AGCAGTTCCT GCCGAGTTTG TTGAGGCCGA GGCTGGTTGG
GAAACCTTTC AGCGCACTGG CAACGCCTTG CCCGAACAAA CTTTAGCGGC TGTCCAAGCG
GCCAATTCAA CCTTGTTTGG CGCAGTTAGT TCGCCATCGC AGCGGGTCGC TGGCTATCGC
AGTCCAATTG TTGGCATGCG CAAAGCCATT GATTTATATG CCTGTGTGCG GCCAGTCCAA
ACGCCACCGC TGGCCAACGC CCGCGCTGGA GTCAATTTGG TGGTGGTACG CGAAAATACC
GAGGGTTTGT ATAGCGGCCA AGAAACCCGC GAGGGCGATG AACGGGCTAC GGCGCAACGA
ATTATCACCC GCCAAGCCAG CGAACGGATT GTGCAATGGG CAGTCCAATA TGCCCAACGC
ACTGGCCGCC GCAAAATCAC GGTGGTACAC AAAGCCAATG TGCTACGCGA AACCTGTGGT
TTGTTCCGCG AAACTGCACT GCGCGTGCTA AGCGATGCGC CCGATTTACA AGTTGAAGAA
ATGTTAGTCG ATAACGCTGC TTATCAATTG GCGCGTGCTC CCGAGCGCTT TGAAGTGTTG
GTCACCACCA ATTTGTTTGG CGATATTCTC TCAGATGTAG CTAGCGTTTG GGGTGGCGGG
CTTGGTTTGG CAGCATCGGC CAATTATGGC ACGCGCACGG CGGTATTCGA GCCTGTGCAT
GGTAGCGCAC CGGATATTGC CGGCCAAGGC ATCGCCAATC CCTTGGCAAC CTTGAGCGCT
AGCGTGTTGA TGCTCGAATT TGTGGGCTTG AACAGCTACG CCGAGCGTTT GCAAACTGCG
ATTCAAGCGG TATTAGCCAA TGGGCCATAT ACGCCCGATC TAGCTGGCGC GGCGACGACT
GCCGAAGTAG TGCAAGCCGT GATTGACCAA TTTTGA
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| Protein sequence | MTRLCLIAGD GIGREVVQAA RQVLEALAVP AEFVEAEAGW ETFQRTGNAL PEQTLAAVQA
ANSTLFGAVS SPSQRVAGYR SPIVGMRKAI DLYACVRPVQ TPPLANARAG VNLVVVRENT
EGLYSGQETR EGDERATAQR IITRQASERI VQWAVQYAQR TGRRKITVVH KANVLRETCG
LFRETALRVL SDAPDLQVEE MLVDNAAYQL ARAPERFEVL VTTNLFGDIL SDVASVWGGG
LGLAASANYG TRTAVFEPVH GSAPDIAGQG IANPLATLSA SVLMLEFVGL NSYAERLQTA
IQAVLANGPY TPDLAGAATT AEVVQAVIDQ F
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