| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3225 |
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| Symbol | |
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| ID | 5735093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4080694 |
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| End bp | 4083552 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280371 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001545990 |
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| Protein GI | 159899743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00720883 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGT TAACCAGCCC CCATTCCCCA GCGACCAGTC CCCAAAAGAC TATGGCACAA
TCAAACAGCA ATCAAACTCT ATTAACTCCG CGCCAAGAAC GGCGCTTGGC GCGGGTTGCC
CGTCGTCAAG CCCGCCCGTG GTGGCTCAAA GCACTCATCC TGCTGGTTGA ACTGCTGCTC
ATTGGCGTAT TTTGCGTGCT TGCGGCAGGC TTGGGCGGTT ATTGGTATTT TAGTCGTAAT
TTGCCTTCGA TTGATAATTT GGGTACGCAT CGCGCCTTTG AAACCACCAA ACTCTATGCC
CGCGATGGCA CAACCTTACT GTATGAAATT TTCGATCCCA ATGCTGGTCA ACGCACGGTT
GTGCCATTCA GCGCATTCTC CGAGTATTTG AAACAGGCCA CAATTGCAGT CGAAGATAGT
AATTTTTATA CTAATCCTGG GGTCAATTTA CCTTCGATCG CCCGCGCCGC GCTAGCCAAT
TTGACCGATC AAGAATCCGG TCAAGGTGGT GCATCAACCA TTACTCAGCA GTTAGTGCGC
AATGTGTTGC TCTCACCCGA GGAGCGTAGC CAACAAACGC CGCAACGTAA AATTCGCGAA
GCAATTTTGG CCTATCAAAT TAGCCAACGC TACTCCAAAG ATCAAATTTT AGCCTTGTAT
TTGAATGAAA TTCCTTATGG CAATAATGCG TATGGTGCTG AGGCCGCTGC CCAAGCCTAT
TTTGGGGTTA GCGTGAGCGA CCTGAGCTTG GCCCAAGCAG CGATGCTGGC TGGCTTGCCG
CAATCGCCGT CGCAACTTGA CCCGTTGGTT AATGCCGATG CCGCCAAAAA ACGCCAAGAA
ATTGTCTTGG CAGCGATGGT GCGCAATGGG GTGATTACGC CGCAACAAGC TGAGCAAGCT
TTTGCTGAGG TGTTGTATGT CAAGCCAGCC CAAGTTAATT TAACCGCGCC GCATTTTGTG
TTTTATGTGC GCGAATTGCT TGAAGCTCGC TACGGCCCCG AATTGCTCTA TCGCGGCGGC
TTGCGGGTCA CCACGACGCT TGATCCACAT TGGCAAGCGA TTGCCCAACA AGAGGTGCAA
CAACGCATTA GCGAAATTGC CCAGCAAAAT GCGACCAATG GCTCGGTTGT GATGCTTGAT
CGCAAAACCA ACCAAATGTT GGCGCTGGTT GGCTCAGCCG ATTACAACAA TACGGCGATT
GATGGTCAAG TTAATGTGGC GTTGGCCGAA CGGCAACCTG GCTCAGCGCT CAAACCGTTT
GTCTATGCGG CGGCCATGCT CCGCGATTGG ACTGCTGCCA GTGTTCTGTG GGATGTACCA
ACTGAATATC GTTTTGCGGG TGGCGAAGTT TATGCGCCCA AAAATTATGA TCGCAGTTTC
CACGGCCCCG TTTCAATTCG CGTCGCCTTA GCCAATTCAT TCAACGTGCC AGCAGTCAAA
ACCCTCGATC ATGTCGGGAT TGATGAGTTT TTGCGCTTGA TGCAGCGGGT TGGCATCAGC
ACCTTGGATG ATCGCCCACG CTATGGGCTT TCGTTGGCGC TGGGTGGTGG CGAGGTTAAG
CTGCTTGAAT TGACCACAGC CTACAGCGTT TTTGCTAACG AGGGCAATTA TCGCCCAGCC
ACAACCATTT TGAAGGTGGT GAATACTCGT GGCGAAGTGC TTGAGGCTTG GAGCGAACCA
CCAAAACAAG CGGTGCTCGG CCCCGATGGC AATGGGCTTG CCTTTATTAT TTCGAGCATG
CTCAGCGATA ACAAAGCCCG CGAATGGATG TTTGGGCCAG ATAATGCCAT GGAATTACCG
AATGATCGTC CGGCGGCGGT CAAAACTGGC ACAACCGACG ACGACCGCGA TAGCTGGACG
GTTGGCTATA CGCCGAGTGT AGTGATTGGT GCATGGGTCG GTAACAGCGA TAATAGCCCA
ATGCAAGCAG TTCCAGGCTC GTTTGGCGCA GCAGTGATTT GGAATCGGCT AATGACTAAA
TATCACGAAG GTTTGCCAAT TGAGCAATTT ACCCCGCCTT CAAATGTTTC CGAACATGAA
GTTTGTATTC CAACTGGCAC CAAGCCATCA GCCGCCTGCC CCAACATTCG CACGGAATAT
TTTGTTAATG GCACGGAGCC TGTCGAAACC GAAAACGTCT ATCGCACCGT GCGGATTGGG
CCAAGTGGCG ATTGTGTAGC GCTGCCCAAT CAGCCAGGCG AAGATCGGGT ATTTGCAATC
TATCCTGATG AGGCGGGCAA TTGGGGCGAA ACTGGTGGCT TAGGCACTCC GCCAACCAAG
CCTTGCCCGT TGGTCAATTC GACCAGTGCT GGTGGCGCAA ATGTGGCAAT TGCCTTGATC
GAGCCAAGTG ATGGAGCGGC CTTAGCCTCG CCAATTCGAA TTCGCGGCAG CGCGGCTGGC
GATTACAACG TGGCTTGGGG CACTGGCACC AATCCAAGCA GTTGGACGAC CATTATCGAA
GGCTTTGGCG GAATTTCTAA TGGTTTGCTG GCGATGTGGA ACGCCGATGG CTTGCCTGAG
GGAGCCTATA GCCTGCGTTT GTTGGTCAAG CAAAGCAACG GCATGAACGA ACAACGGGTA
ACAATCTATC TTGATCGAAC TGCGCCAACG ATTTCAATTA ATCTACCAGC CTCGGCCTTG
CGCGGCCAAC CACTGCAATT CCAAGCCACT GCCCAAGATG ATCGTCAGCT GGCTAAAGTT
GAGTGGACGG TTAATGGCGA GGTGTTTATG CGCGATCAAG CACCGTATAG CCTTGATTTC
AGCCCAACTC AAGCTGGAAA TTATCGGGTT GTGGCCACGG CAATTGATCA AGCAGGCAAC
CGCGCAACCA GTAGTGTCAG TGTGCTGAGC GTTAAATAG
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| Protein sequence | MLMLTSPHSP ATSPQKTMAQ SNSNQTLLTP RQERRLARVA RRQARPWWLK ALILLVELLL
IGVFCVLAAG LGGYWYFSRN LPSIDNLGTH RAFETTKLYA RDGTTLLYEI FDPNAGQRTV
VPFSAFSEYL KQATIAVEDS NFYTNPGVNL PSIARAALAN LTDQESGQGG ASTITQQLVR
NVLLSPEERS QQTPQRKIRE AILAYQISQR YSKDQILALY LNEIPYGNNA YGAEAAAQAY
FGVSVSDLSL AQAAMLAGLP QSPSQLDPLV NADAAKKRQE IVLAAMVRNG VITPQQAEQA
FAEVLYVKPA QVNLTAPHFV FYVRELLEAR YGPELLYRGG LRVTTTLDPH WQAIAQQEVQ
QRISEIAQQN ATNGSVVMLD RKTNQMLALV GSADYNNTAI DGQVNVALAE RQPGSALKPF
VYAAAMLRDW TAASVLWDVP TEYRFAGGEV YAPKNYDRSF HGPVSIRVAL ANSFNVPAVK
TLDHVGIDEF LRLMQRVGIS TLDDRPRYGL SLALGGGEVK LLELTTAYSV FANEGNYRPA
TTILKVVNTR GEVLEAWSEP PKQAVLGPDG NGLAFIISSM LSDNKAREWM FGPDNAMELP
NDRPAAVKTG TTDDDRDSWT VGYTPSVVIG AWVGNSDNSP MQAVPGSFGA AVIWNRLMTK
YHEGLPIEQF TPPSNVSEHE VCIPTGTKPS AACPNIRTEY FVNGTEPVET ENVYRTVRIG
PSGDCVALPN QPGEDRVFAI YPDEAGNWGE TGGLGTPPTK PCPLVNSTSA GGANVAIALI
EPSDGAALAS PIRIRGSAAG DYNVAWGTGT NPSSWTTIIE GFGGISNGLL AMWNADGLPE
GAYSLRLLVK QSNGMNEQRV TIYLDRTAPT ISINLPASAL RGQPLQFQAT AQDDRQLAKV
EWTVNGEVFM RDQAPYSLDF SPTQAGNYRV VATAIDQAGN RATSSVSVLS VK
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