Gene Haur_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3146 
Symbol 
ID5735018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3974553 
End bp3975512 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID641280289 
ProductABC transporter related 
Protein accessionYP_001545911 
Protein GI159899664 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA TCGTTGAAAC CCACAATTTA ACCCAGCGTT TTGGCACACA CCTAGCGCTC 
AATCAGGTCA ATTTGAGCAT TCCCAAAGGC GCGGTCTATG GTTTTATTGG GCCAAATGGC
GCTGGGAAAA CCACCACCAT GCGCATTTTG ACCACCTTGC TCCAACCAAC CGCTGGCGAA
GCCTTTGTCA ATGGCATTTC GGTGCGCCAA GATCCCGATG CAGTGCGCAA AATGATTGGT
TTTATGCCTG ATTATTTTGG GGTTTACGAA AGCATGCGGG TTTGGGAATA TCTCGATTTC
TTTGCTCATA TCTATGGCAT CAAACAGCCA CGCCGCACGA GTTTGATTCA AGAATTATTG
CAACTAGTCG ATCTGACCGA AAAACACGAT AGTTATGTGA TGAATCTCAG CCGTGGTATG
AAACAGCGCC TCAGTTTGGC CCGCACCATG GCCCACGATC CCAGCTTGTT AATTCTCGAT
GAACCAGCCA GCGGGCTTGA CCCTCGTGCC CGAATCGAGC TACGCGAATT ACTGCGCGAA
TTAAGCCGCA TGGGCAAAAC GATTATGGTT AGCTCACACA TTTTGTCGGA GCTGGCCGAA
ATGTGTAGCC ATATTGGCAT TATTGAGCGT GGCACATTGC TGGCAAGCGG CCCAGTCGAA
CAAATTATGC AGGATTTACG CCCGCATAAA TTGATCGAAG TGCAAGTGCT TGAACGAGCC
ATGCCAGCCT TGCAAATGCT CAAACAACTG CCAACCATCA ACGATGTGCA TTTAGCCAAT
GAGCTAGCCG ATGATCAGGC AGGCGGCAAA TTGGCGATCA ACTTCAGTGG CACAGCCGAA
GAAAGCAGCG CAATTTTGAG CAACCTGATC AGCCAAGGCT TTCGGGTCAA TCACTTTGCC
GAACGCCAAT CCGACCTTGA AGAAGTCTTT TTGCATGTGA CACAGGGAGT GGTGGCATGA
 
Protein sequence
MELIVETHNL TQRFGTHLAL NQVNLSIPKG AVYGFIGPNG AGKTTTMRIL TTLLQPTAGE 
AFVNGISVRQ DPDAVRKMIG FMPDYFGVYE SMRVWEYLDF FAHIYGIKQP RRTSLIQELL
QLVDLTEKHD SYVMNLSRGM KQRLSLARTM AHDPSLLILD EPASGLDPRA RIELRELLRE
LSRMGKTIMV SSHILSELAE MCSHIGIIER GTLLASGPVE QIMQDLRPHK LIEVQVLERA
MPALQMLKQL PTINDVHLAN ELADDQAGGK LAINFSGTAE ESSAILSNLI SQGFRVNHFA
ERQSDLEEVF LHVTQGVVA