| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3091 |
|---|
| Symbol | |
|---|
| ID | 5734963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3900461 |
|---|
| End bp | 3901606 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641280235 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001545857 |
|---|
| Protein GI | 159899610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.105972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTG GGCTGTGGCA AACCCCTGAG CCAACAGCCC AGCCCCAGCT TGTACAAACC
TTGGTGATTG GTGCGGGCTT GATTGGCTCG TACTTAGCGC TGCAAAGCCA AGCCGACGTT
GTGCTCGATG CCCGTCACGT TGCTGGCGGC GCTTCGGGGC GCAACGGTGG CTTGCTATTG
ACTGGCATTG CCAATTCGTA TCAGGCGGCT TGCGCTGAAT ATGGCCGCGA TTTAGCCCAA
AGCTTGTGGC GCACAACGAT TCGTAATCGT GAGTTGATGA TCGAATGGGC GACCAAGCTT
GGCTCACCGG TACGGCGTTG TGGTTCGTTA ATTTTTGCCT ATAGCGAGCA AGAACATGCC
GAGCTAGCCC ATGCGGCAGC CTTGATGCAT GAAGATGGTT TTAGCACCGA ATGGCACGCC
GAAGATCCAA CCAAGCGTGG TTTTTGGGGC GCGTTGCACA ACCCCGATGA TGGTGCAATT
CAAGCCGCCT TGTTGACTGC GGCGCTCCTA CGCGAAAGCG GCGCACAGCT CTATGAAGCT
AGCGAGGTTT ACGCGCTTGA ATCAACTGCT GATGGCGTGT TGGTGCGGTC ACGGACTGGC
AATTGGCTAG CCCAACGGGT TTTGGTGGCA ACTAACGCTT GGACAGGCCT GCTGTTGCCT
GAATTTAGTC AGTTGGTGAT TCCGGCCCGT GGCCAGTTGT TGGCAACCGC TCCAATCGAG
CCAATTTTGA GCCAAGCCTG CTATTGCGAT TATGGCTTTA CCTATTTTCA GCAAACGCCT
GCTGGCAATT TGGTGCTGGG TGGTTTTCGT AATCGCGCGG TTGCTGAAGA GCAAACCTTT
GCCGATTGCA CAACACCGTT GATCCAAGAT TTGCTTGATG GCTTTTTGCA GCGCCACTTC
CCTGAGGCTG CCGCTGCGCC GATTGAACGA CGTTGGGCGG GCACAATGGG CTTTGCACCC
GATCATCGCC CCTTGGTTGG GCGTTTACGC CGCGATGACC GAATTGCCTT TGCTGTGGGG
TTTAGCGGCC ATGGCCTTGG CTTAGGCTTG GTTGCCGCCG ATGAACTGCT AGCCGAGTTG
GCTGGCACAC CTGCTGCCTT GTTTAGCGCT CGACGTTTTA GCGAAACTGC CCACCTGTTC
AGTTGA
|
|---|
| Protein sequence | MSVGLWQTPE PTAQPQLVQT LVIGAGLIGS YLALQSQADV VLDARHVAGG ASGRNGGLLL
TGIANSYQAA CAEYGRDLAQ SLWRTTIRNR ELMIEWATKL GSPVRRCGSL IFAYSEQEHA
ELAHAAALMH EDGFSTEWHA EDPTKRGFWG ALHNPDDGAI QAALLTAALL RESGAQLYEA
SEVYALESTA DGVLVRSRTG NWLAQRVLVA TNAWTGLLLP EFSQLVIPAR GQLLATAPIE
PILSQACYCD YGFTYFQQTP AGNLVLGGFR NRAVAEEQTF ADCTTPLIQD LLDGFLQRHF
PEAAAAPIER RWAGTMGFAP DHRPLVGRLR RDDRIAFAVG FSGHGLGLGL VAADELLAEL
AGTPAALFSA RRFSETAHLF S
|
|---|
| |