| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3073 |
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| Symbol | |
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| ID | 5734945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3880872 |
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| End bp | 3882305 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641280217 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001545839 |
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| Protein GI | 159899592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA GCGATTGGCA AACGCCCGAT TGGGTCAAAC ATGCCGTCTT TTATCAGATT
TTCCCTGAGC GCTTTGCCAA TGGTGATCGG ACAAATGATC CGGCAAATGC GCAACCTTGG
GGTACAAGCC CAACCTTGTA TAATTATATG GGCGGCGATC TACAAGGAAT TATCGATAAG
CTTGATTATT TAGTGGATTT GGGCATTAAT GCGCTGTATC TCAACCCAAT TTTTCAAGCC
ACCACCTCAC ATAAATATAA TACCTTCGAT TATTTTAAAA TCGATCCCCA TTTTGGTACG
CTAGAAACGT TTAAAACCTT ATTGAATGAA GCGCATCGAC GTGGCATTAA AGTTATTCTC
GATGCGGTGT TTAATCATTG CGGTCGCGGC TTTTTTGCCT TTCACGATGT AATTGAAAAT
GGTGTGCACT CGCCCTACAC CAATTGGTTT CATATCTCAC GCTTTCCAAT TCATCCCTAT
GAATCGCGCT ATGCCGCTAA TTATCGCACG TGGTGGGATT TTCGCGAGTT GCCCAAATTC
AACACCGATA ATCCGGCGGT ACGCAAATAT TTGCTTGATG TAGCTCGCTA TTGGATTGAA
TTGGGTATTG ATGGTTGGCG CTTGGATGTG CCAAATGAAA TTGATGATCA TAATTTTTGG
CGTGAGTTTC GCACAATTGT CAAAGATATC AATCCTGAAG CCTATATTGT GGGCGAAATT
TGGACTGACG GCTCAGCTTG GCTGCAAGGC GATCAATTTG ATGCCGTGAT GAATTATCTA
TTTCGCGATT TATGTACCGA TTTCTTTGCT AGCTATCGGG TACGTGCCGC TGATTTTGCG
GCTGGAATTG ACCATTTAAT TGTGCGTTAT CAGCCCCAAG TGACCTATGT CCAATTTAAT
TTGCTTGGTT CACACGATAC TGCGCGGTTT TTGAGTGTGG CTGAAGAAGC TGGTAAATGG
GCTTTAGAGC GCATGAAATT GGCGGTTTTG TTCAAATTAA TCTTTCCTGG TGCGCCATGT
ATCTATTATG GCGATGAAAT TGGCTTGCAT GGCGGCAAAG ATCCTGATTG TCGGCGTTGT
TTCCCGTGGG ATCAACCGCA AACCTGGCAG ACCGATCTCC AAGCTTGGAC CAAACGCTGG
GTTAAGTTTC GCCATGAGCA TACAGCCTTG CGCACGGGCC ATTATGCGAC GCTGTTTGCC
GACAACGATA TGAATATTTT TGCTTGTGCC CGTTGGGATG AGCAAAGCCA ATTTGTGATT
GTGCTGAATA ATAACGAAAC ACCTTGGACA CTCGATTTGC CGTTGCATGC CCAATTACCA
AGCGTCACTC ATTATCGCGA TGTGCAAACT GGCGAGTTGT ATAGCGTGGC CGAGGGTAAA
ATTCGCGAGG TAGCATTGGC TCCGTGGAAG CATTTGGTAT TACAAGCTGA ATAG
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| Protein sequence | MTTSDWQTPD WVKHAVFYQI FPERFANGDR TNDPANAQPW GTSPTLYNYM GGDLQGIIDK
LDYLVDLGIN ALYLNPIFQA TTSHKYNTFD YFKIDPHFGT LETFKTLLNE AHRRGIKVIL
DAVFNHCGRG FFAFHDVIEN GVHSPYTNWF HISRFPIHPY ESRYAANYRT WWDFRELPKF
NTDNPAVRKY LLDVARYWIE LGIDGWRLDV PNEIDDHNFW REFRTIVKDI NPEAYIVGEI
WTDGSAWLQG DQFDAVMNYL FRDLCTDFFA SYRVRAADFA AGIDHLIVRY QPQVTYVQFN
LLGSHDTARF LSVAEEAGKW ALERMKLAVL FKLIFPGAPC IYYGDEIGLH GGKDPDCRRC
FPWDQPQTWQ TDLQAWTKRW VKFRHEHTAL RTGHYATLFA DNDMNIFACA RWDEQSQFVI
VLNNNETPWT LDLPLHAQLP SVTHYRDVQT GELYSVAEGK IREVALAPWK HLVLQAE
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