| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3046 |
|---|
| Symbol | |
|---|
| ID | 5734918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3847245 |
|---|
| End bp | 3848255 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641280190 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_001545812 |
|---|
| Protein GI | 159899565 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0205239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAT ATAGTTTAGG GTTGTTGCTG GTATTGGTGG TTGGTTGTGG CCAAAGTACA
GCCACAGTTC AGCCAAGCCA AGTGAGCCAA AGCCAACAAC AAACCACCAC CGCTGATCAA
ATCATGCCAA CGGCAACCGC AATTAGCACC GCGCCAGTCA GCCAAATTCG CGTCGTTACA
ACCATGAGCA TTTTGGCCGA TGTGATTAAG CAGGTTGGTG GCGAACGGGT GCTTGTTGAT
AATATTATTC CCTTGGGCGC TGGCCCCGAA GATTATCAAG CTACGCCTGG CGATAGCCAA
AAAATTGCCG ATGCCAATAT TGTGTTTTTC AATGGCCATG CGCTTGAGGA ATGGCTCGAA
CCCTTGTTCG AAAATGCTGG GGGCAGCGAG CAGCCAAGGA TTGAATTATC TGCTGGTTTT
GCAGTGATTG AAGAAGAACA TGCTGAAGAA GAACACGCTG ATGAAGAACA TGCTGATGAG
CATGCTCACG AAGAAGGCAA CCCGCACTTT TGGCTTGACC CAACCTATGT GATGTCGTAT
ACCCTGACGA TTCGCGACCA ACTTAGTGCG ATCGATCCCA GTGGCAAGGA TGTCTATGCA
GCCAATGCCG AAGCCTATCT TGGCCAATTA CAAGCGCTCG ATCAAGAATT GCAAGGCTTG
GCGGCCCAAA TTCCGGCTGA ACGGCGCAAA CTCGTGACCA ACCACGATGC CTTTCCGTAT
TTTGCCCACC ACTATGGCTT TGAAGTTGCT GGCGTGTTGT TGGATAACCC CGAAGCCGAG
CTTTCGGCTG GCGATTTAGC GGCTTTGGTC GAGAGCGTTA AGGCCAGCGG CGTGCCGGCA
ATTTTCTCTG AATCGCAGTT CAACCAAAAA ACTGCCCAAT TGCTGGCGGA TGAAGCTGGG
ATTGAAACCA TTGCGGTGTT GTATACCGAC ACTTTAGGCA GCGATACTGC AACTTCCTAT
ATCGACATGA TGCGGTACAA TATGAATACT ATTGTTGCTG CGCTCAAATA A
|
|---|
| Protein sequence | MRRYSLGLLL VLVVGCGQST ATVQPSQVSQ SQQQTTTADQ IMPTATAIST APVSQIRVVT
TMSILADVIK QVGGERVLVD NIIPLGAGPE DYQATPGDSQ KIADANIVFF NGHALEEWLE
PLFENAGGSE QPRIELSAGF AVIEEEHAEE EHADEEHADE HAHEEGNPHF WLDPTYVMSY
TLTIRDQLSA IDPSGKDVYA ANAEAYLGQL QALDQELQGL AAQIPAERRK LVTNHDAFPY
FAHHYGFEVA GVLLDNPEAE LSAGDLAALV ESVKASGVPA IFSESQFNQK TAQLLADEAG
IETIAVLYTD TLGSDTATSY IDMMRYNMNT IVAALK
|
|---|
| |