| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3044 |
|---|
| Symbol | |
|---|
| ID | 5734916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3845239 |
|---|
| End bp | 3846108 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280188 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001545810 |
|---|
| Protein GI | 159899563 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00612109 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGTA CCGATTTTTG GAACTGTGTC GTGGTTCCCT TACAATTTGC GCCGACTCAA
CGCGCCCTGC TTGCCGCGAT CCTGATTGGA ATTCTGTGTT CGGTCGTGGG CGCATTTGTG
GTGCTGCAAG ATTTATCGTT TATTGGCGAT GCCTTGGCCC ATGCCTCGTT TCCTGGCGTG
GTGATTGCCT CGATGCTCGG CTGGAATATT GCTTTGGGCG GGGCGATTTT TGGGGTGGCT
ACCGCCTTAG GTGTTGGCTG GATTACTCGC CGCTCCAAAG TTAGCCTTGA TACTGCCATC
GGGGTGTTGT TTGCTGGCAT GTTTGCCTTG GGCATTTTCC TGCTTTCGCG TGATCGTGGC
TACAACAAAG AACTATTTGG CTTGCTGCTT GGCGATATTC TGGCGGTGCG TCAGAGCGAT
CTCTGGACGA TTGTGGGAGT TGGCGGATTA ATTCTGGTGG TGATTGCAGC GCTCTACAAA
GAATTAGTGC TAATGACCTT TGATCGCACT GCGGCGGCGG CCCAAGGCTT GCCCGTAGGA
TTTTTGCACT ATCTGCTGCT CAGTATTATG GCGATCACGG TGGTGGTGGC AATTCAAAGC
ATCGGCATTG TGCTGGTGGT GGCGATGTTG GTTACGCCTG CGGCAACCGC TTCGTTGGTG
GTGCGACGCT TTTGGTCAAT GATCGTTTGG GGTTCAGTGC AAGGGCTGAT TGCGGCAACG
ATTGGCATTT ACGTTTCGGC CTATATCGAT GGCGTACCAA CTGGCTCATC GATTGTTTTG
GCGCATACAG CGATCTTTTT GCTGGTATTG GTGCTTGCGC CGCGCAAAAA TGCTTTAGCT
GGCTTGTTTC AACGCAAAGT TGCTGACTAA
|
|---|
| Protein sequence | MKCTDFWNCV VVPLQFAPTQ RALLAAILIG ILCSVVGAFV VLQDLSFIGD ALAHASFPGV
VIASMLGWNI ALGGAIFGVA TALGVGWITR RSKVSLDTAI GVLFAGMFAL GIFLLSRDRG
YNKELFGLLL GDILAVRQSD LWTIVGVGGL ILVVIAALYK ELVLMTFDRT AAAAQGLPVG
FLHYLLLSIM AITVVVAIQS IGIVLVVAML VTPAATASLV VRRFWSMIVW GSVQGLIAAT
IGIYVSAYID GVPTGSSIVL AHTAIFLLVL VLAPRKNALA GLFQRKVAD
|
|---|
| |