| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3006 |
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| Symbol | |
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| ID | 5734893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3795932 |
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| End bp | 3797155 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280150 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001545772 |
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| Protein GI | 159899525 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT TCCTTTCATT CTCGCTCGTC TTGACCATGA TCATGGTGAT TTTGGCCGCA
TGTGGCACCC AAACTGGTGG AACAACCAAA ACTACCGTCA CGATTGTTAG TAGCTTACCC
CGCACCGGTT CCTCAAAAGG ACAAACAGAT ACCATTGTAA ACGCCATTAA GATGCGTTTA
GAAGAAGCCA AATACACCGC GTGCGATGGG AATGTTGAGA TCAAGTATGA AGATCTTGAC
GATGCAACCG CAGCTAAAGG CGCTTGGGAT GAAGCGAAAG AAGCCGAAAA CGCTAATGCT
GCTGCTTCAA ACAAAGATGT GATGGTCTAT ATCGGTACCT TCAACTCAGG TGCTGCCAAG
ATCTCGATTC CGATCTTGAA CAATGCTGGG ATTGTGATGA TCAGCCCTGC CAACACCTAC
CCTGGCTTGA CCAAGGATGG CAAAGGTGCT GAAGGCGAAC CAGCAGTTTA CTATCCCAAA
GGTACGCGCA ACTACACCCG CGTGGTGCCA GCCGACGACT TGCAAGGCGC TGCCGCAGGC
AACTGGGCCA AAGAATTGGG CGTAACCAAT GTCTACATCT TGGATGATAC CGAGTTGTAT
GGCAAAGGGA TTGCTGACGT ATTTGCTGCT ACCGCTGAAA AGAATGGCAT CAAGATTGCA
GGTCGCGATA GCATCGATGC CAAAGCTAGC GATTACAAGG CGTTGATGTC GAAAATCGCC
GCTACCAACC CCGATATGAT CTACTTCGGT GGCATCACCC AAAGCAACGC AGGCCAATTG
GTCAAAGACA TGCGGGCTGC TGGGATGACC GCTGATAAAG TTAAGTTCAT GGGTCCAGAC
GGGATCTTCG AACAAGCCTT TATCGACGCT GCTGGTGCTG ATAACGCTGA AGGCGTTTAT
GCAACCTTCG GTGGCGTTCC ACCAGCCAAG CTTGAAGGCA AAGGTGCCGA ATGGTACAAC
GCCTACAAGG CCAAATTCAA CGCTGAACCA GAAGCCTACG CTGTCTACGG CTACGAATCA
ACCAACGTGG CGTTGGCTGC GATCAACCAA TCATGTGCTA GCATCAACCG CGAAACCATC
TTGAAGAACG TTTTCGCAAC CAAAGATTTT GATGGCGTGT TGGGCAAATG GGGCTTCGAT
GCAAGTGGCG ACACGACATT GACCCAAATG AGCGGCCAAC AAATCAAGGG TGGCGCGTTC
GAATTCGTTC AAGTCCTCAA GTAA
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| Protein sequence | MKRFLSFSLV LTMIMVILAA CGTQTGGTTK TTVTIVSSLP RTGSSKGQTD TIVNAIKMRL
EEAKYTACDG NVEIKYEDLD DATAAKGAWD EAKEAENANA AASNKDVMVY IGTFNSGAAK
ISIPILNNAG IVMISPANTY PGLTKDGKGA EGEPAVYYPK GTRNYTRVVP ADDLQGAAAG
NWAKELGVTN VYILDDTELY GKGIADVFAA TAEKNGIKIA GRDSIDAKAS DYKALMSKIA
ATNPDMIYFG GITQSNAGQL VKDMRAAGMT ADKVKFMGPD GIFEQAFIDA AGADNAEGVY
ATFGGVPPAK LEGKGAEWYN AYKAKFNAEP EAYAVYGYES TNVALAAINQ SCASINRETI
LKNVFATKDF DGVLGKWGFD ASGDTTLTQM SGQQIKGGAF EFVQVLK
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