| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3004 |
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| Symbol | |
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| ID | 5734891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3792895 |
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| End bp | 3794646 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280148 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001545770 |
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| Protein GI | 159899523 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.940026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATA CAAAGCGCTA TTTGATAACT GGTGGAATTG GCTTTGCAGT TGGGACATTC
TTTTTATGGA ATTACCCGAA TCTTGCGCTT GGCTCGGCAA TAATTGGTGG TCTGGTCATT
GCCGCGCTCT GTTTGCTCTA TAGTGCGCCC TTACCCGATA TGGTTAAAGG TGGCTTAATT
GCTGGTTTGT TCGGCGCAGT CATGACAATT GTCTATGGCC CCGATAAGCC AGGGGTGGCG
ATTATTGCGG GCATGCTCAG TGGTTTGGGC GCTGGTTTGC TGGCATTTCA ACGCAAACCA
CAAGCAACGC CCCAAGCTGG GGCTGCTTTG GGCGCTGGGG CTGGCGCAAT TGCTGGCGCT
TGGACGGCCC TCGCCCTCTT TTTAACTGCC TTTGTGATCG CTCCCGCCGC TGGGGTTGAT
GCTAGCGAGT TTGCCGAGCA TTTATCCGAA ACCGTGATTT TGGCTGATGC GATGGGCTTA
GCCAGCGATA TTCTGATTTT GCTGTTTGTG TTGGTGTTTT GTACCATCAC TGGCGCATTA
TTGGGGGCGG CAGCGGGTGC AGCACGGGCT TTGCCGTTGC GGCCTAATAT CCCACTGTTA
GCGGTGATTG CCCTGCCAGT GATCTTGATT CCCTTGATTG ATCGTGCTGG CAACTTGCTC
TTGCTTGATG CCTTGATTCC GATTTATATC TTTATTCTCC TGGCCTTAGG CTTGAACATT
GTGGTGGGTT ATGCGGGCTT GCTTGATTTA GGTTATGCAG CCTTCTTTGC AATTGGTGCT
TACACCACCG CCATGCTCTC ATCGCCGCAC CTTGGCATCA ACATTAGTTT TTGGTTGGTA
ATTTGGGTGG CGGCGGCGGT CGCGGCAATT GCTGGTTTAG CCTTGGGTGC GCCCACGCTA
CCCTTACGAG GCGACTATTT GGCGATTGTG ACCCTTGGTT TCGGCGAAAT TGTGCCGATT
CTCTTCCGCA ACCTTGGTGG TGGCCCACCC ACAGGAACCT TGACCTTGCG CTTCTTCGGC
CTGCCAATTG GGATTGAACA GATGGACTTG ACTGGTGGTA ATAAGGGGAT TAACCCAATC
TCGCCGCCAA ATTTGCCGTT GATTGGCAAT TTCGAGCCAT CGAACAAAAT TCCTTGGTAT
TACCTGTTGA TTATCATCAT GGGCTTGGCG ATTTTCTTCA TCAACCGCCT GCGTGATTCA
CGCCAAGGCC GCGCTTGGAT GGCCATGCGC GAGGATGAAT TGGCCGCTGA TGCCATGGGT
ATCAACGTAG TACGCACCAA GTTGTTAGCC TTCTCGATGG GGGCAATGTT CTCAGGCTTT
GGTGGTGCGT TCTATGGCGC ATTCATCGGA GCGATTTTCC CAAGCTCATT CGACTTTAGC
GTTTCAATCA TCTTGCTCTG TATGGTGATT CTTGGTGGTT TGGGCAATAT GGCCGGGGTG
ATTGTCGGTG GCTTGCTAAT TCAGGGCGCT GATAAGATGT TTATCCCCAA AGGTGCCGAA
TTGTTCCGCG ATATTGCTGA CCAGAGAGCC CTCACCACCG GTGGTAGTAC GGTCGGGGTT
TCCGCTCTAC AAGATTTGAC CCAACAACGT TTATTGTTGT TTGGCATCGT GTTGGTGGTG
ATGATGCTGA TTCGACCAGA AGGCCTGTTG CCCAACGAGC GCCGTAAAGC CGAATTACAT
TCCGATGATG ATCCGATCAA TATCAATAGC GTGGCAGCCG AGGCGGATGC TGATCCGTCG
TTGGCGGCGT AG
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| Protein sequence | MPNTKRYLIT GGIGFAVGTF FLWNYPNLAL GSAIIGGLVI AALCLLYSAP LPDMVKGGLI
AGLFGAVMTI VYGPDKPGVA IIAGMLSGLG AGLLAFQRKP QATPQAGAAL GAGAGAIAGA
WTALALFLTA FVIAPAAGVD ASEFAEHLSE TVILADAMGL ASDILILLFV LVFCTITGAL
LGAAAGAARA LPLRPNIPLL AVIALPVILI PLIDRAGNLL LLDALIPIYI FILLALGLNI
VVGYAGLLDL GYAAFFAIGA YTTAMLSSPH LGINISFWLV IWVAAAVAAI AGLALGAPTL
PLRGDYLAIV TLGFGEIVPI LFRNLGGGPP TGTLTLRFFG LPIGIEQMDL TGGNKGINPI
SPPNLPLIGN FEPSNKIPWY YLLIIIMGLA IFFINRLRDS RQGRAWMAMR EDELAADAMG
INVVRTKLLA FSMGAMFSGF GGAFYGAFIG AIFPSSFDFS VSIILLCMVI LGGLGNMAGV
IVGGLLIQGA DKMFIPKGAE LFRDIADQRA LTTGGSTVGV SALQDLTQQR LLLFGIVLVV
MMLIRPEGLL PNERRKAELH SDDDPININS VAAEADADPS LAA
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