Gene Haur_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2889 
Symbol 
ID5734760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3659780 
End bp3660430 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID641280032 
ProductTetR family transcriptional regulator 
Protein accessionYP_001545655 
Protein GI159899408 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00514184 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC CTAACGAAAA ACTCAGCGGT CGCCAGCCCG ACAGCACCGC CCAACAAACC 
CGCCAGCGGA TTTTGGTCAG CGCTCGCACG CTCTTCGCAA TGCAGGGCTT TGAAGGGATT 
AGTTTGCGCG ACATTGCCAG CCATGCCGAG GTAACCCATG GCTTATTGCG GCACCATTTT 
GGCTCGAAAG ATGCGGTTTG GCAGGCGGTG GTCGATGCAG CGCTGGCCGA ATATCTCGCG 
GCCTTATTGC CATTGGTCAA TAGCGCAATT GCCGAGCAGC ACGAACCAAG CGCCGTGATC 
AAACGCTCAC TTGCCACAAT TATTCGGCTC TCGGCCAGCT TTTGCGAAGT ACCATGTTTG 
ATGGTGCACG AAAGCATTAC TGGTGGCGAA CGGCTGAATT ATTTTATGCA GCAATTACGC 
CCGCTTAGCG CCATGATGCA GCCATTTTTC GAGGCTCTGC GGGCTGAAGG CAAATTTCAA 
CAATTTAGCC ATCCTACGTT TTTGCTCGCC GTGATTTCAT TGGGGATTTT GCCCTTGGCG 
CTGGCTTCGT TCAGCAATGC CTTGGCGCAA ATCAATATTT TGGCTGAGGC TGAGCTTGAA 
CTGCATATCG AGCGGGTGAT TGCGACATTA ATGCCTTGGA CAACCAGTTA A
 
Protein sequence
MNQPNEKLSG RQPDSTAQQT RQRILVSART LFAMQGFEGI SLRDIASHAE VTHGLLRHHF 
GSKDAVWQAV VDAALAEYLA ALLPLVNSAI AEQHEPSAVI KRSLATIIRL SASFCEVPCL 
MVHESITGGE RLNYFMQQLR PLSAMMQPFF EALRAEGKFQ QFSHPTFLLA VISLGILPLA 
LASFSNALAQ INILAEAELE LHIERVIATL MPWTTS