| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2856 |
|---|
| Symbol | |
|---|
| ID | 5736893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3625402 |
|---|
| End bp | 3627084 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641279999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001545622 |
|---|
| Protein GI | 159899375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00133424 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAA CCAACTGGCA GCGCGAGGTT GAACAAGCCT TAGCTCAAAA CGACCACAAT
CGAGCCAAAC AGCTTTTAGC CGCCGTGATT CGCCAAAATG TGCATGAACG CGAGGCCTGG
CGCATTTTAG CGAGCATCGT CAATGATCCA GCCCAACAGG CCGAGTGTTT GCGCCGAATT
GCCGCAATTG ATGCCGCCAC GCCAACTGTG ATTAAGCCAA TTAAGCCAAT TGCTGCCGTA
GCACCAAGCA CTGAGCTACC AAGCGATCCA AGCACTAGCC CAACCACGCC CTTGGTTGCT
GTACAGGATA CGCCTAATTT TACGCCATCA AGCATTCAAA CTGAGCCATT ATTTGATTCA
CAAGCTAGTT TCACGCTGCC AGCCAATTAC AGTATGGGCC AAGCAACCCA GAAACTGGAT
CAACCAATGC CGCAACCTGC TCGTTCGTTG CCTAAAATGT TAATGTTGAT TGGAGCAAGT
TTGTGTGGTT TGGGCTTGTT GCTTTTGCTT GGTTTACAAT TTTGGCCATT GTTAAATGAT
ATCAACTCAA CGCCCGCTAG CGAACAACCG CTGCTAGCCG TGGTTGAACT CACGATTGTA
CGATCGGGCG TTGGTCAAGT GCCGATGACC GATCAGGCCA TGGTCTATTT TGAAATTGAA
AATCCCAGTG ATCAAGCACT GTATAACATT CCCTATACCA TGACCTTGAC CAGCCAATTT
GATAAAGTGC TGAAAAATAC CAATACGATT GAATTATTGC TGCCCAAGCA AAAAATCGTG
GTTGTTGATG GGATTTTTAC TGGGGATAGC TTTCGCGCCA AAAGCGTCGA AATTAGCCTA
GGCCAGGGCT ATCCAATCAC AATTGATCAA CCAATTCCAC AAGTTGAGGC GCTTACTCCA
ACCACGTTTG GCATGCCCTT TCGTGGGCGT TTGCAGGAAA GTTGGGGCTA CGAATACCCA
ACTTATCATG TTAGCGCGAT TGCAACCGAT AGTGGTGTGG TTACTTCAAC CTTGGTATCA
ATGCTGTTTT ACGATACGAA CGATCAAATT ATTGGCGCTG GTTCGGGCTA TATCGATTAC
ATTAATAAAA AAACTTCATT GCCAAATACT CGCCGTGGTG AAACGATGGT CTATCCCATT
ATTTGGGGCA CGAGTGAGGT CGATCGGGTT GAAATTGTGC CTGCATTTAC TTTAGCAACA
TTTAGTCAAC AACCCCCTAT TAAGCCTAAA AAGGCTGAGA TCGATCAAAT GTGGCTAGGT
GAATATATTC CAGAGGTTGA TCCACCATAT CATGTACAAG GTATTGTTGA ATATCCAACA
TTACCGCCAA CCTCAGGCTA TCATGCGATG GTGCCAGCAG AATGGGGGCA TTACGATAAT
TTTATTACTG ATGAGGCAAT GGTACATAAC TTAGAGCATG GTGCGGTGAT TATTTTTTAT
AACCCACAAT TAATTACTGC AAATGAGCTT GGCCAATTAG AAGCAACTTT TGAAAATCTT
TATCAACGCG AACATCATAC AATTTTGCAA AAACGCTTCG ATTTGGATGC AACTGTGGCA
ATGACTGCGT GGGAATATCG TTTGATGCTG CGCGATAATG TTAATCTCGA TGCAGTCAAC
ACGTTTTTCA GTGAACATAT TGCCCGTGGC CCTGAATGCG TTAATTTACG CTGTCCTAAT
TAA
|
|---|
| Protein sequence | MEPTNWQREV EQALAQNDHN RAKQLLAAVI RQNVHEREAW RILASIVNDP AQQAECLRRI
AAIDAATPTV IKPIKPIAAV APSTELPSDP STSPTTPLVA VQDTPNFTPS SIQTEPLFDS
QASFTLPANY SMGQATQKLD QPMPQPARSL PKMLMLIGAS LCGLGLLLLL GLQFWPLLND
INSTPASEQP LLAVVELTIV RSGVGQVPMT DQAMVYFEIE NPSDQALYNI PYTMTLTSQF
DKVLKNTNTI ELLLPKQKIV VVDGIFTGDS FRAKSVEISL GQGYPITIDQ PIPQVEALTP
TTFGMPFRGR LQESWGYEYP TYHVSAIATD SGVVTSTLVS MLFYDTNDQI IGAGSGYIDY
INKKTSLPNT RRGETMVYPI IWGTSEVDRV EIVPAFTLAT FSQQPPIKPK KAEIDQMWLG
EYIPEVDPPY HVQGIVEYPT LPPTSGYHAM VPAEWGHYDN FITDEAMVHN LEHGAVIIFY
NPQLITANEL GQLEATFENL YQREHHTILQ KRFDLDATVA MTAWEYRLML RDNVNLDAVN
TFFSEHIARG PECVNLRCPN
|
|---|
| |