Gene Haur_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2409 
Symbol 
ID5734290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3071595 
End bp3072356 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content53% 
IMG OID641279550 
ProductABC-2 type transporter 
Protein accessionYP_001545177 
Protein GI159898930 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCGC TACGTGATAC ATGGCTGCTG TTTAAACATT ATCTCACCAT GACCATGCGC 
AACCCAGTAA TGGTGATTGT CGGCCTTTTT CAACCAGTGG TGCAATTGTT ATTATTTGCA
CCCTTGTTAG AGCCAATTGC TGGGACTGAG GGCTTTCCCG AAGGCGGCGC AATCGGAGTT
TTTACCCCAG GTTTGCTGGT GATGTTGGGC ATTACTGGCT CGTTGTTTGT GGTATTTGGC
TTTATTGCCG AGTTACGGGC GGGCGTGCTT GAGCGCATGC GGGTTACGCC GCTGAGCCGT
TTGGCGCTGG TGCTTGGACG TTTGCTGCGC GATGTCACGA TGTTGCTGCT GCAAGCCTTG
GTGCTGGTTG GCGTGGCATG GCTGATGGGC TTGCGGGCTG ATCCTGCTGG CGTAGCACTT
TCGCTGTTGA TTGTGGTGCT GCTGGGCTTG TTGGTTTCTT CATGCTCATA TGCGGTTGCG
CTCATTTTGC AGGATGAAAA CACAGTTGCC TCGTTGCTCA ACTTTTTGAT CTTGCCAATT
TTGCTGCTTT CAGGCATTAC CCTACCGCTC ACTTTAGCGC CCGATTGGAT TCGCAATGTC
GCGGGAGTTA ATCCATTTGC CTATGCTGTT GATGCCTCGC GGGCCTTGTT TATTGGCCAA
CTTGAGCATC CGGCGGTTTG GCAAGGCTTT GCAGTGATGG GCGTATTGTC GTTCTTGGGT
GTTTTTTGGG CGGTGCGCTC CTTTCGTCAA GGCGTGGCCT AG
 
Protein sequence
MQSLRDTWLL FKHYLTMTMR NPVMVIVGLF QPVVQLLLFA PLLEPIAGTE GFPEGGAIGV 
FTPGLLVMLG ITGSLFVVFG FIAELRAGVL ERMRVTPLSR LALVLGRLLR DVTMLLLQAL
VLVGVAWLMG LRADPAGVAL SLLIVVLLGL LVSSCSYAVA LILQDENTVA SLLNFLILPI
LLLSGITLPL TLAPDWIRNV AGVNPFAYAV DASRALFIGQ LEHPAVWQGF AVMGVLSFLG
VFWAVRSFRQ GVA