Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2409 |
Symbol | |
ID | 5734290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3071595 |
End bp | 3072356 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641279550 |
Product | ABC-2 type transporter |
Protein accession | YP_001545177 |
Protein GI | 159898930 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCGC TACGTGATAC ATGGCTGCTG TTTAAACATT ATCTCACCAT GACCATGCGC AACCCAGTAA TGGTGATTGT CGGCCTTTTT CAACCAGTGG TGCAATTGTT ATTATTTGCA CCCTTGTTAG AGCCAATTGC TGGGACTGAG GGCTTTCCCG AAGGCGGCGC AATCGGAGTT TTTACCCCAG GTTTGCTGGT GATGTTGGGC ATTACTGGCT CGTTGTTTGT GGTATTTGGC TTTATTGCCG AGTTACGGGC GGGCGTGCTT GAGCGCATGC GGGTTACGCC GCTGAGCCGT TTGGCGCTGG TGCTTGGACG TTTGCTGCGC GATGTCACGA TGTTGCTGCT GCAAGCCTTG GTGCTGGTTG GCGTGGCATG GCTGATGGGC TTGCGGGCTG ATCCTGCTGG CGTAGCACTT TCGCTGTTGA TTGTGGTGCT GCTGGGCTTG TTGGTTTCTT CATGCTCATA TGCGGTTGCG CTCATTTTGC AGGATGAAAA CACAGTTGCC TCGTTGCTCA ACTTTTTGAT CTTGCCAATT TTGCTGCTTT CAGGCATTAC CCTACCGCTC ACTTTAGCGC CCGATTGGAT TCGCAATGTC GCGGGAGTTA ATCCATTTGC CTATGCTGTT GATGCCTCGC GGGCCTTGTT TATTGGCCAA CTTGAGCATC CGGCGGTTTG GCAAGGCTTT GCAGTGATGG GCGTATTGTC GTTCTTGGGT GTTTTTTGGG CGGTGCGCTC CTTTCGTCAA GGCGTGGCCT AG
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Protein sequence | MQSLRDTWLL FKHYLTMTMR NPVMVIVGLF QPVVQLLLFA PLLEPIAGTE GFPEGGAIGV FTPGLLVMLG ITGSLFVVFG FIAELRAGVL ERMRVTPLSR LALVLGRLLR DVTMLLLQAL VLVGVAWLMG LRADPAGVAL SLLIVVLLGL LVSSCSYAVA LILQDENTVA SLLNFLILPI LLLSGITLPL TLAPDWIRNV AGVNPFAYAV DASRALFIGQ LEHPAVWQGF AVMGVLSFLG VFWAVRSFRQ GVA
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