| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2181 |
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| Symbol | |
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| ID | 5734068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2763374 |
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| End bp | 2765080 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641279322 |
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| Product | putative glycosyl hydrolase |
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| Protein accession | YP_001544949 |
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| Protein GI | 159898702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTCA TGAGTCAGCG GCGCTTCAAA ATTATTATAT GGCTCCTCTT TTTGCTCATC
CTTGGTCAAT GTGGCTGGTG GGGAGTTGGT CGGGTTGCCT GGCTTGTCGC TAGCTTCCAG
CAAGGTGCCG ACCCTGCTAG TGCCCTAAAA TTGCCACCCA TGTTGCCGCC CGAAGCCGCA
ATCGCAACAC AGTGGCTGCC TGACGACCCC GACACTGGTC GTGTGATGGA AGATTTTACT
CGCCAACAAC TGACCAGCGA TTATGGTCGA GCGTGGCTCC AATGGAATCT TTCCTTGAAG
ATTGGCCGTC CCTACAATTT ACACACCAGT TTTAGTGGGC CAGCCTTGCA TTATCTCACG
ACTAGTATCA GCACGACTGA GAATATAAAG ATCGATCAAA TTGATACAGC CCACCAATTA
CAACTGCATT TCTATGCAGC AGATGGCTCA ATTGTAGCTC TGACCGATAC CCAAGCCGAG
ATCTATCAGA TGATCTATGA TGCTGACGGG GAAATAGTAT CGGCTCAATG GTTGTATGCA
CGCTATGAGA TTGTGATGCT GTTGCAAGAT GGCACATGGC GAATTCGGCA TTGGGTTCGC
CACGAACTGC CAACCCCGAT AGAACCCTCG TATCAACCAA GGCCTCAACT GTTGCAGGTT
AATCAGCAAC AGTTACAACT TGCCGATCAG CCTTTTATCG CCCGAGGCGT TAATTATTAT
CCTTCTAAAA CTCCATGGCT ACAATTTTGG CCTGCCTATC AACCCCAACA AACGACAAAA
GATCTCGCGT TAGTTCAACA ACTAAATTTG AATAGTGTGC GGATTTTCAT TCCGTTTGAG
CAATTTACCG AACCCTATAG CACAAGTCTC TATCTACGTT CTGTGACCGA TTTTCTGGAT
CAGGCTGATC AAGCGAACAT CAAGGTCATT GTCACCTTAT TCGATTTTTT AGGCGATTAT
CAGCTGGCAC GCTGGCAAGC AACCGACAGC TATTTAACAA CCGTGGTAAC TGCATTACGA
GAACATCCGG CGATTATGGC ATGGGATGTT AAAAACGAGC CAGATCGTGA TTATGCAACT
GCTAGTCAGG TAGTGGTTGA GGCATGGCTC CAGCATAGCA TCCGCCAGCT TCGTCGGCTT
GATCCCCATC ATCTGATTAC GATTGGCTGG TCTACACCTG AAGCTGCTGA ACGGTTATAT
CAAGATGTCG ATTTGGTCTC GTTTCATTAC TATGGATCAA CTGAACTATT GGCAACCCAC
TATCAACGCC TCAGACAGGT AGTTGGCGAG AAACCGCTCC TGTTAACTGA GATTGGGATG
CCAACCTGGA ATAGCCCATT TTTTCCTCAT GGCCACAACC AGCGTGAGCA AGCAAACTAC
TTAACGGGAT TAATGCAACA AGCCGAAGCC TATAATGGTT TTTTGATCTG GACACTCTTC
GATATTCCTG AGGTTCCAAA GGCTGTTGCT GGGTTTTGGC CATGGCAACG TGGCCCGCAA
ACCCAATTAG GACTCTATAA CGAGACCTAT GAACCAAAAT TAATCAGCAA AGTGTTGTTG
GGGCTTGAGC CTAGCCCGTT TATTCGCTGG TGGGAGGCGT GGCTCAAGCC GTTTCGAATA
ACGCTTATCG TGCTAAGCAT GCTTGGATTA ATCGGAGGAT GGCAGGGTTA TCGCCGCTGG
AAACGCAAAA AACACCCAAA GATTTAA
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| Protein sequence | MWFMSQRRFK IIIWLLFLLI LGQCGWWGVG RVAWLVASFQ QGADPASALK LPPMLPPEAA
IATQWLPDDP DTGRVMEDFT RQQLTSDYGR AWLQWNLSLK IGRPYNLHTS FSGPALHYLT
TSISTTENIK IDQIDTAHQL QLHFYAADGS IVALTDTQAE IYQMIYDADG EIVSAQWLYA
RYEIVMLLQD GTWRIRHWVR HELPTPIEPS YQPRPQLLQV NQQQLQLADQ PFIARGVNYY
PSKTPWLQFW PAYQPQQTTK DLALVQQLNL NSVRIFIPFE QFTEPYSTSL YLRSVTDFLD
QADQANIKVI VTLFDFLGDY QLARWQATDS YLTTVVTALR EHPAIMAWDV KNEPDRDYAT
ASQVVVEAWL QHSIRQLRRL DPHHLITIGW STPEAAERLY QDVDLVSFHY YGSTELLATH
YQRLRQVVGE KPLLLTEIGM PTWNSPFFPH GHNQREQANY LTGLMQQAEA YNGFLIWTLF
DIPEVPKAVA GFWPWQRGPQ TQLGLYNETY EPKLISKVLL GLEPSPFIRW WEAWLKPFRI
TLIVLSMLGL IGGWQGYRRW KRKKHPKI
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