Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2035 |
Symbol | |
ID | 5733924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2530551 |
End bp | 2531006 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641279179 |
Product | PilT domain-containing protein |
Protein accession | YP_001544806 |
Protein GI | 159898559 |
COG category | [R] General function prediction only |
COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0116997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGT TGACGACCCT TGCCCCGATC CGGCGGTTGT ATTTCGATAC GGCTCCTTTG ATTTACTATA CGGAGGGGCA TGCGCAGTAT TTACCAACGC TGCGGGTCAT TATGGGGCAA ATTGCTCCCG ATCAGATCCA CGCGATCACC TCGGTGTTAA CGCTCACCGA AACGCTGATG AAACCGCTCC AGCAGCAGCA GATGGCCCTC GTGCACCAGT ATCGCCTCCT CTTTTATCAA ACTGCGGCGC TGACGATGGT GCCGATTACG GCTCCGATTG CTGAGTTGGC GGCTACGCTC CGGGCGCAGT ATGGGCTGCG GACTCCGGAT GCGTTACAAC TCGCGACGGC GATTGATGCG GGCTGTGATG CCTTTTTAAC CAATGATTTT GCCTTGCAGC GGGTTACTGA GATACCGGTA CTGGTGGTCG ATGCCTTGGC AAACGTGGCT CCTTAA
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Protein sequence | MSVLTTLAPI RRLYFDTAPL IYYTEGHAQY LPTLRVIMGQ IAPDQIHAIT SVLTLTETLM KPLQQQQMAL VHQYRLLFYQ TAALTMVPIT APIAELAATL RAQYGLRTPD ALQLATAIDA GCDAFLTNDF ALQRVTEIPV LVVDALANVA P
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