Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1806 |
Symbol | |
ID | 5733708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2099017 |
End bp | 2100093 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641278949 |
Product | periplasmic binding protein |
Protein accession | YP_001544577 |
Protein GI | 159898330 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.455628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCCC TTTCAGTTCG TTTTCGTTCG TTATTGGCCT TACTCGCGCT TGTGACCTTG GCTGCTTGTG GCTCGACTAC GGCTCCAACT GCCACCACCG CCCCAGCGGC CACCGAAGCT TCTGCGGCAA CCATTCCTCC AGCAGGAAGC GAAGTGCCAG CGGAAACCGA AGTACCAGCC GCGACCGAAG CGCCAACCGC CGAAGCAACT ACAGAAACCA GTGCTAGCGG CACACGCAGC ATTGAAACCC GCTATGGCAC GGTCGAAGTG CCAGCAACTC CTGCTCGGTT GGTAACGCTT GATGAAGGCG CATTGGATAC CGCCGTGGCC TTGGGCATTA TCCCAGTTGG TGGCATTAGC TCACGTTTGA GCGAAGGCGT TGCTCCCTAT ATCGCCGATA AAGTGCCTGG GATTGCGATT GTTGGTAACC CTGGCGAAAT CAATTTCGAA GCAGTGATTG CTGCTACCCC CGACTTGATT TTGACCCACA ACCGCATCGA CGAAGAAACC TACAAAAAAT TGAGCGCAAT TGCTCCAACC ATTGTGCCAA CCAACGGCAT TGGCGCTTGG AAGGATGCCG CTGGCGAATA TGCCGCAGCC TTGGGCAAAA CCAGCGAACT CGAAGCTTGG TTGAAAGAAT TCGATGCGAA AGTTGCTGAT GCCAAAACCA AATTGGCAAT CAAAGAAGGC ACGACTGGCG CAGTTATCCG CTGGATGCCC CAAGGCCCAT TGGTGATGGG TCGCTTGTTG CCAGCAGTTG TCTTGATCGA AGAATTGGGC TTGAGCTTGC CCCAAGTGGC GATCGATTTG GGCACTGATG CACCACACAC TGATGTTTTG AGCTTGGAAC AATTGGCAAC CGTTGATACC GACTGGTTGT TTGTGGCCAC GTTCAATGCT GAAGGTGATG GCGCTTTGGC AACCGCCCGC GAACAAGCAG CGTTTGGCCA ATTGAAGGCT GAAAAATCCA AGCAAGTTGT GGCGGTTAGC GCTCAACTCT GGAGCAGCGC GTTTGGTCCA TTGGCTGCCG ATGCAATTTT GAGCGATATT GTCGCTGGCG TTCCTGCGGC ACAATAG
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Protein sequence | MTSLSVRFRS LLALLALVTL AACGSTTAPT ATTAPAATEA SAATIPPAGS EVPAETEVPA ATEAPTAEAT TETSASGTRS IETRYGTVEV PATPARLVTL DEGALDTAVA LGIIPVGGIS SRLSEGVAPY IADKVPGIAI VGNPGEINFE AVIAATPDLI LTHNRIDEET YKKLSAIAPT IVPTNGIGAW KDAAGEYAAA LGKTSELEAW LKEFDAKVAD AKTKLAIKEG TTGAVIRWMP QGPLVMGRLL PAVVLIEELG LSLPQVAIDL GTDAPHTDVL SLEQLATVDT DWLFVATFNA EGDGALATAR EQAAFGQLKA EKSKQVVAVS AQLWSSAFGP LAADAILSDI VAGVPAAQ
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