Gene Haur_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1557 
Symbol 
ID5733444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1807949 
End bp1808803 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID641278696 
ProductUbiA prenyltransferase 
Protein accessionYP_001544328 
Protein GI159898081 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA ACGCTAAATC TGACTGGTTG GCCTATCTCG AACTGATGCG CATCTCCAAT 
AATCCGACCG TGATCAGCAA TACATTGGCT GGCGTGGCTT TGGCGGGAGT CAGCCTTGGT
GATTGGCGGG TATGGCTATT GGCCTTGGCC TTCAGTTTGT TTTATAGCGC TGGCATGGTT
TTTAACGATT GGTGCGATTA TGCGATTGAC CAACGCGAAC GCCCAGAACG CCCATTGCCG
AGCGGTCGGG TGAGCCGCAA CGCTGCGTTG GTGCTGACAA TCGGCTTATT TGGCATTGGC
TTGGCTTGTG TGGCCTTGGT TAGTTGGCAA GGCCTGCTGT GGGCGGGTGG CTTGGTTGGG
CTGATCGTAG TTTACGATCT GTGGCACAAA ACCAACCCAA TCAGCCCAGT TTTGATGGCT
AGCACGCGCA TTTTGGTTTA TCTCAGCACG ATTGCCGCCT TGGGTGCAGC CTTTTCGTGG
CAGGTTTGGC TGGCGGTTGG CTTGTTGTTT AGCTATGTGA TGGGCTTTAC CTTTATCGCT
AAATCGGAAT TACGCCCGCA GTTGAAGGCG CTTTGGCCAG CGATTTGTGT GCTGTTGCCA
ATTGGCTATG CCCTGATTAC CCCCGATTTT AGCCCAATTC TGGTGAGTGT AGCCTTGCTA
AGTTGGTCGT TGCACAGTAT ACGTTTGGTC TATCGTCAGC GCCAAATTGG CCCAGCGATT
GGCCGTCTGA TTGCTGGCAT TAGCCTGTTT GATGCCTTGG TGTGCATTGT GGCAGGCAAT
TTGTGGGCAT GTGCATTTGC CATCGCCGCC TTTGGCCTGA CCCGTTTGGC GCAGCGCTCG
ATTCAAGGAA CTTAA
 
Protein sequence
MNSNAKSDWL AYLELMRISN NPTVISNTLA GVALAGVSLG DWRVWLLALA FSLFYSAGMV 
FNDWCDYAID QRERPERPLP SGRVSRNAAL VLTIGLFGIG LACVALVSWQ GLLWAGGLVG
LIVVYDLWHK TNPISPVLMA STRILVYLST IAALGAAFSW QVWLAVGLLF SYVMGFTFIA
KSELRPQLKA LWPAICVLLP IGYALITPDF SPILVSVALL SWSLHSIRLV YRQRQIGPAI
GRLIAGISLF DALVCIVAGN LWACAFAIAA FGLTRLAQRS IQGT