| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1544 |
|---|
| Symbol | |
|---|
| ID | 5733431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1798663 |
|---|
| End bp | 1799232 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278683 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001544315 |
|---|
| Protein GI | 159898068 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC CTAAAAGCTG GATTTTGAGT CTCTACTACT TTTTGACCTT TGGTGGTTTT
GTGGCGATGG CGGTGTATCT GCCAACCTTG CTGACTGATT TATTTGGTAT CAGCAAAACC
GATGCTGGCT TGCGGACTGC TGGCTTTGTG CTGGTTGCCA CCGCTGCGCG GCCATTTGGC
GGCGTGTTGG CCGATAAAAT CGGCGGCACA ACAATTTTGA AATGGGTTTT TCCCATCACT
ACCTGTATGG CAGGCCTGAT GGCTTTTAGC AATGTTATGC CATTTACGAT TGGAGCCTTG
GGTATGGCGG CGGCAATTGG CTTAGGCAAT GGGGCAGTGT TTAAATTAGT GCCTGAATAT
TTCCCGCAAT CGGTGGGGAT TGTGACCGGC TTGGTGGGTG CGGCTGGTGG TTTAGGCGGC
TTCTTCCCGC CTTTGCTGCT GGGCTACATT CGCCAACAAA CTGGCTCGTT TAGCTATGGT
TTTGTAGCTT TGGCGATGTT TACGCTTGTT TGCTGGTTTG TGCTCTACTA CAATAATCGC
CCCCGCCGCC CAACTCCTCA ATTAGCTTAA
|
|---|
| Protein sequence | MSSPKSWILS LYYFLTFGGF VAMAVYLPTL LTDLFGISKT DAGLRTAGFV LVATAARPFG
GVLADKIGGT TILKWVFPIT TCMAGLMAFS NVMPFTIGAL GMAAAIGLGN GAVFKLVPEY
FPQSVGIVTG LVGAAGGLGG FFPPLLLGYI RQQTGSFSYG FVALAMFTLV CWFVLYYNNR
PRRPTPQLA
|
|---|
| |