| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1534 |
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| Symbol | |
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| ID | 5733421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1787524 |
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| End bp | 1790130 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641278674 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001544306 |
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| Protein GI | 159898059 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTAC TTGATGATGC CTTCGAATCA ACGGTTACAC CGGCACTTAC GTCTTACATC
TGGCTCCTGC GTTGGTGTGA TTCGGCTCAG TTGGCTCACC TAACGCCTTA TTCACCCGAA
CAGATCGAAC GCTTTTGGCA AAGCGCCTTG GTCATTGAAC ACCCCCATCA TGGTTGGTAT
CAACTACGCG AAGCACCTAG CTTAAATGAA CGACCTTATC GTGAGCACGA AGTCTTTGCT
GCCGCCTTTG AGTATAGCCA GCAACAACTC AATCGTCTAG AGGCTGAAGC TTGGCAATTT
GAACTCCAAC GCTGGCTCTA CTACCTTGAG GAATATTTGG AAGTGCTTTC GGCTCGCCGC
GATTGGCCAA CCATCGCCGC AGTGCTCGAA AAAGCCACCA GCATTCCGCA AGTCAATCTG
CGCCAACAGC AACTGCTGAT GCTCTACAAG GCGATTATCA CCATGCGGCT TGAACGTCAG
TATGATACCG CCCAAAGCTT ATTACAACAA TTACGCGATG ATATCCAGCT TGAAGCCGAT
TTAGTGCCGA TGGTGATCAA CAGTATGGGC ACATTAGCAT GGTTTCGCGG AGCCTACGAT
CAGGCGATTC AACATTATAT TGAGCAACAT CAACACGCTC AGCAGGTGCA AAATTGGCTC
TATCAAGGCC ACAGTTTGCT CAATCAGAGC ATTTTATCCA ACCAACTACA ACGCCCAGAA
TACGCCTTGG AGCTAAGTTT ACAAGCGCTC GAAGCCTTAC AACGGGCGGG CAATCGCTAT
CGCGAGGCGC ATGCGCTCTA CGAAGTTGGC TCGAATTTGC TCTATTTGTG CCGTTGGGAT
GAGGCCGATA GCTATTTTTC ACGCTCGGCG GCGCTCTACG AAACCCTCGA TACGATCGGC
GATTTGGCCA ATTTGTATTG GCATATTGGC TTTTTGAAGC ATTTAGCAGG CGATTTGCCG
GCCAGCGAAC AAGCCTATCA AATTAGTATT GAGGCGGCGC GGGCCAGCGT TGTGCCCAAT
GATGATAGTC TGCGCGATTC GTTGGCATTT TTGGGCTTGC TCTATTGCAG TATGCACGAG
TATCAAACGG CCTTGGAAAT TTATGCTCAA GCCGAAGCCT TAGCCCGCCA ACACAACAAT
CGCCATGAAT TAGCCCTGAT TCTCAATCAG CGCGGCGATG CTGAACGGCG GAGCGGGGCA
ATTGATGCAG CCTACGCCGC CTTTGCCGAA TCGATCGCAA TTATTGAAGA TTTACGCACC
TCGTTCGGCG ATGAAGATAC CAAATTGGGC TTGATTAGTA CAGCCCAACA GGTTTATGAG
CATATGGTTG TGCTATGTAT TGAGCGCGGC GATGCGGCTC AAGCAGTCAA TTATATCGAG
CGAGCACGTT CGCGAGCCTT CCTTGATGCG CTGCAAGCTG GCGATGAAAG TACCGCAATT
GAGCTTTCGC AGCAATGTGC CGATTTGGCC GAAATTCAAG CCCAACTTGA CCAACGCACA
GCGGTGATCG AATACTTTAC GGTTGGCGTA TTAGGTCGAT CATTGCGTTT CTTGGCAGCG
TTGGCCGAAC GCAAATCACC CATTTTACAT CATTTCAGCC TTGATCCAGC CTTGTATAGT
GTGGCAATTA CGGCCAACAA TGCCACGATT CATCAGCATA GCTTCAATCC ATTGAATCTA
ACGCGCGGCC ATGGCGGGCA TCATCGCTTG CTACAACCTC GGATTTTGAA GGCCATTTCG
CAAGCATTAA TCGAGCCATA CGAAGCCATG TTGGCGACAG TTGATTTGGT GTATGTTGTG
CCGCATGGTC CGCTACACGA TGTACCATTT ATGGCCTTGC AAACTAGCGA CGGCAATTGG
TTGGTGCGCG AAGAAAACCC AGCGATTGCC TTGGCTCCTA GTGCCACTAT TTTGGTGCGC
TATGCCTTAG GTCGCGCCGC CAGCAGCCAA ACTCAGCACT ATTGTTTTGG CTACAACAGC
GTCGGAGCCG AAGCCCTGAC CTATGCTGAA CACGAAGCCC AAGAAATTGC CAAATTAGTG
GGTGGGCAAG CATGGACAGG CGCATTAGCC ACCGATCAGT TTTTGCGCTA TGCCCACGAT
GCGCGAATTA TTCACATCGC CTCGCACTGT GTGTACGATG CTCAACAGCC ATTAAATTCG
CACTTGATTC TTGGCCACGA AACGCTAAGC GCCCAAACGA TTATGGATCA GGTTGAAATT
GACACAGATT TGGTAGTGTT AAGTGCTTGT GTCAGTGGAC GCAGTTTTGT GGCGGTCAGC
GACGATCAAT ATGGCCTACA ACGGGCATTT TTATATGCCG GAACCCGTAG TTTACTCTGC
TCGTTGTGGA ACGCCTCGGA TGTAGCGGCG TTGTTCGTGA TGGATCGTTT TTACCGTGAA
TTGCAGGCCG GAGTACGCAT TGCTATAGCA CTCAAACATG CCGTCATCGC TGTACGTGAC
TTGACGCGGG CTGATATTAT TAAACAGTTC CAGCTTTGGC AGCTACCAGC TAGCGCAATT
CCGCTCGAAC CAGACGGCCA GCACAGCGAA AGCCCTTTGG CAGACCCGCG CTTTTGGGCT
GGCTTTATGG TGATTGGCAA AGCCTAA
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| Protein sequence | MVLLDDAFES TVTPALTSYI WLLRWCDSAQ LAHLTPYSPE QIERFWQSAL VIEHPHHGWY
QLREAPSLNE RPYREHEVFA AAFEYSQQQL NRLEAEAWQF ELQRWLYYLE EYLEVLSARR
DWPTIAAVLE KATSIPQVNL RQQQLLMLYK AIITMRLERQ YDTAQSLLQQ LRDDIQLEAD
LVPMVINSMG TLAWFRGAYD QAIQHYIEQH QHAQQVQNWL YQGHSLLNQS ILSNQLQRPE
YALELSLQAL EALQRAGNRY REAHALYEVG SNLLYLCRWD EADSYFSRSA ALYETLDTIG
DLANLYWHIG FLKHLAGDLP ASEQAYQISI EAARASVVPN DDSLRDSLAF LGLLYCSMHE
YQTALEIYAQ AEALARQHNN RHELALILNQ RGDAERRSGA IDAAYAAFAE SIAIIEDLRT
SFGDEDTKLG LISTAQQVYE HMVVLCIERG DAAQAVNYIE RARSRAFLDA LQAGDESTAI
ELSQQCADLA EIQAQLDQRT AVIEYFTVGV LGRSLRFLAA LAERKSPILH HFSLDPALYS
VAITANNATI HQHSFNPLNL TRGHGGHHRL LQPRILKAIS QALIEPYEAM LATVDLVYVV
PHGPLHDVPF MALQTSDGNW LVREENPAIA LAPSATILVR YALGRAASSQ TQHYCFGYNS
VGAEALTYAE HEAQEIAKLV GGQAWTGALA TDQFLRYAHD ARIIHIASHC VYDAQQPLNS
HLILGHETLS AQTIMDQVEI DTDLVVLSAC VSGRSFVAVS DDQYGLQRAF LYAGTRSLLC
SLWNASDVAA LFVMDRFYRE LQAGVRIAIA LKHAVIAVRD LTRADIIKQF QLWQLPASAI
PLEPDGQHSE SPLADPRFWA GFMVIGKA
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