Gene Haur_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1508 
Symbol 
ID5733393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1758366 
End bp1759040 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID641278646 
ProductHNH endonuclease 
Protein accessionYP_001544280 
Protein GI159898033 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AAGTTTTTGA CAATGGGGAT GATGAGAAAT ATTTTCGGTG GATGGAGCAA 
CATTTAGATG GGTTTATTTT GAATGTTGAG CGCGTTTCTA AATCATTACC TGTGGTATTG 
CATTGCTCGA ATTGTGGCCA TATTCGGCGT GGATTGGCTG AAGGTGCATT TACTGGGCGT 
GACCAGATTA AAATTGCGGC GTTTGTGGTT GATGAATTGA TTCGATGGCG TAACAAGTAT 
CGTCCAGATG CTACCGTTAA ATACTGTAGT GACTGTAAGC CAGCAAAATC TGTTCTTGAG 
CAATTCTTAT TTTATCCTGA CGAGCTTGAT TCGCAAGTTG AGCTTGATTC ACGAGCTGAA 
CTTTGGGAAG GCGCTAAAGT ACAAGTTTTG GTTAATCAAT ATGAACGTAA TGCACAGGCT 
CGCCAACGCG GTATTGCCCA ATATGGCACA CGTTGTTTGG TTTGTGAGCT TGATTTTGTC 
GAGCGTTATG GCCCAATTGG CGAAGGTTTC ATTCATGTGC ATCATATCAA GCCATTAGCC 
TCGATTAATG CAGGGTATCA GGTTGATCCG ATTAACGATC TCCGTCCCGT TTGCCCAAAT 
TGTCACGCCA TGCTGCATCG TGGTAAAGAG CAACCGCTAA CTATCGAAGA ATTACGGGCT 
TTGCTCAAGC GTTAA
 
Protein sequence
MSYQVFDNGD DEKYFRWMEQ HLDGFILNVE RVSKSLPVVL HCSNCGHIRR GLAEGAFTGR 
DQIKIAAFVV DELIRWRNKY RPDATVKYCS DCKPAKSVLE QFLFYPDELD SQVELDSRAE 
LWEGAKVQVL VNQYERNAQA RQRGIAQYGT RCLVCELDFV ERYGPIGEGF IHVHHIKPLA 
SINAGYQVDP INDLRPVCPN CHAMLHRGKE QPLTIEELRA LLKR