Gene Haur_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1425 
Symbol 
ID5733333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1644949 
End bp1645575 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID641278563 
ProductTetR family transcriptional regulator 
Protein accessionYP_001544197 
Protein GI159897950 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGA AACAGGCGAT GGGCAGCAAA GAACGCCGCG AACGGATCAA ACAAGCCACC 
CGCGAGGGGA TTCTCAACGG CGCACGCCAA ATTGCCCAAG CCGAGGGTTG GTCGGGCTTG 
ACTATCCGCA AGGTTGCCGA GTTGATCGAA TATAGTCCGT CGATGGTTTA TGAATATTTC 
GCTAGCAAGG AAGCAATTTT GGAAGCCTTG TTGGAAATTG GCTTTCAACA ATTGACCAAT 
GCCATGCAAC AAGCCAGTGC TGCCCATGTT GATCCATATC AGCGCTTGCA GGCCATCGCG 
CTAGCCTATT GGCGCTTTGC CCAAGCCAAT CCTGACCTCT ATCAAGTGAT GCATGGCATG 
GATGGCGTGA CGGTTAACCC AGAGTTGCGC AACCAAGCGG CTTGGCCAAC ATGTTTATTG 
GTTGAGCAAG ATTTGCAATC ATTGTTGATC GACGAACAAG TGACGAGTCC AAATTTGCGT 
GAAGATAGCG AAATTCTTTG GGCTACCTTG CATGGAATTG TTAGCCTTGT GCTCAGCCAA 
CGCCTCAGCC AAGCCGAACA GATCGAAGCC CGCATCCAAC GCACAACCCA AGCCTTGTTA 
CAGGGCTTAT TAATGACCAA TTCGTAA
 
Protein sequence
MEWKQAMGSK ERRERIKQAT REGILNGARQ IAQAEGWSGL TIRKVAELIE YSPSMVYEYF 
ASKEAILEAL LEIGFQQLTN AMQQASAAHV DPYQRLQAIA LAYWRFAQAN PDLYQVMHGM 
DGVTVNPELR NQAAWPTCLL VEQDLQSLLI DEQVTSPNLR EDSEILWATL HGIVSLVLSQ 
RLSQAEQIEA RIQRTTQALL QGLLMTNS