Gene Haur_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1239 
Symbol 
ID5733147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp1443142 
End bp1444236 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content50% 
IMG OID641278379 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001544015 
Protein GI159897768 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTG CAGTTACCGG CGGGGCAGGC TTTATTGGCT CCAACTTTGT GCGATATTGG 
ATGGATACAA ATCCTGCTGA TGAGGTTGTG GTGATTGATG CCTTGACCTA TGCTGGCCAT 
CTGAGTAATT TGGCAGGCTA CCACGAACGC GCCAATTGCC AATTTGTGCA GGCTGATATT 
TGCGATTACC CAACCATGCT CAAGGTATTG GCGGGGGTCA ATTTGGTAGT ACACTTTGCC 
GCCGAAACCC ACGTTGATCG CTCGTTGGGT GAGTTTGAAA TGGAGCGTCA ATTTTATCGC 
TCGAATATCG AAGGTACTGC CAGCTTACTA CGAGCTTCCC GCGAGGCTGG AGTTGGGCAT 
TTTCACCATG TTTCGACCGA TGAAGTGTTT GGCGATTTAG ACTTTGATGA TCCGCAAAAA 
TTCCACGAAA CCTATCCCTA TAATCCCAGC AGCCCTTATG CGGTCAGCAA AGCAGCCTCG 
GATCATGTGG TGCGAGCCTT TGCCCACACC CACAAATACC CAATCACCAT CACCAACTGC 
ACCAACAATT ATGGCCCATT CCAAACTCCT GAAAAGCTGA TTCCCCGTTC AATTGCCTTG 
TTACTGGCCG GCCAAAAAGT GAAGCTCTAT ACTGATGCCG AGGGCATTCC AGGCCGTAAC 
ATCCGCGATT GGTTGCATGT GCAAGATCAC TGTGAAGCGA TTGCTTTGGT GATTCAAAAA 
GGTCGGATTG GTGAAACCTA TGGGATTGGC GGCGAGGCCG AGCTTTCCAA CTATCACTTG 
GTCGAAACCA TGCTCGATAT TATGAGCGAA TATTTAGATC GCACGTTGAC AATTGAAAAT 
AGCGTCGAAT TTGTGGCTGA TCGCCCAGGC CACGACCGCC GTTATGCCAT GGATTTGAGC 
AAAATCAAGC GTGAGTTGGG CTGGCAGCCA CGTTATTCGT TCCAACAAGG CTTTTTAGAA 
ACCGTGCAAT GGTACACATC GCCCGAAGGT CAAGCATGGC TGGCAAGCTT GAACGATCGT 
ACCAGCGATG TCCGCGCCAA CCAAGAGCAA GTCGTTGCTG TGCGCGAAAA CTGGCAAGCT 
GAGCATCAAT CCTAA
 
Protein sequence
MRIAVTGGAG FIGSNFVRYW MDTNPADEVV VIDALTYAGH LSNLAGYHER ANCQFVQADI 
CDYPTMLKVL AGVNLVVHFA AETHVDRSLG EFEMERQFYR SNIEGTASLL RASREAGVGH 
FHHVSTDEVF GDLDFDDPQK FHETYPYNPS SPYAVSKAAS DHVVRAFAHT HKYPITITNC 
TNNYGPFQTP EKLIPRSIAL LLAGQKVKLY TDAEGIPGRN IRDWLHVQDH CEAIALVIQK 
GRIGETYGIG GEAELSNYHL VETMLDIMSE YLDRTLTIEN SVEFVADRPG HDRRYAMDLS 
KIKRELGWQP RYSFQQGFLE TVQWYTSPEG QAWLASLNDR TSDVRANQEQ VVAVRENWQA 
EHQS