Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1144 |
Symbol | |
ID | 5733036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1309030 |
End bp | 1310265 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278283 |
Product | patatin |
Protein accession | YP_001543920 |
Protein GI | 159897673 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT CAACCCCATC CAAACGCGCT CTTGTCCTCG CTGGTGGTGG CATCTCTGGT GCCGTTTACG AAATTGGCGC TCTCCGTGCC ATCGATGATC TCCTCACAAC CCTAAGCATC AACGATTTTG ATATGTATGT TGGCACAAGT GCTGGCAGCC TAATTAGCTC GTGCTTGGCC AATGGCATCA CCACCCGCGA GTTGTTGCGC ATTCTCGAAG GTGCTTTGCC CGATGCCAAA CGGCTACAAC GCGACCAAAT TCTGGCGCTC AATTTGCGCG GCTTGATCAA GCGTGGTCGC CGTTTGCCAC GCCTGTTAGC CCAACGAGCA ATCGAAACTT TGCGTCGCCC GCAAGATTTT GCCCCCCTCG ATTGGGCTTG GAAGTTGCTC GAAGGCTTAC CCAATGGCAT TTATTCAACC AATAGCTTAG AACGTTATCT GCGCCATTTC TTGACTGAGC GCGGTAGCAA CCACTTTGCT GAGTTACAGC GTGAGCTTTA TATTGTAGCG ACCGAGCTGG ATAGCGGCGA CCGCGCAGTT TTTGGCGAGG GCAACCTACG TAATGTGCCA ATTTCGGCGG CGGTTGCAGC CTCTAGCGCC ATGCCAATCG TTTATGAGCC AGTTCGGATC AATGGGGTTG ATTATATTGA TGGTGGGGTG CGCGGCACAG CCAGCCTCGA TGTGGCGATT GATCGTGGAG CAAAACTGAT TGTTTGTGTC AATCCACTGG TAGCCTTTGA TAATCGCAAA CATCAGCTTG GCAGCCGCAT CGCCGATGCT GGCATTCAGG CGATTGGCAA TCAGGTATTT CGCACGTTTA TTCAGGCTGG CTTGCACTAT CACATCAAAA AATTGCGCCA ACAGCACCCT GATGTTGATA TTATTTTGAT CGAGCCACGC GCCGACGATG CAATTGTCTT TGCTGAACAT GTGCTGCATT ACGATGAGCG CATGTTGCTA GCTCGCCATG GCTACGAATC AGCTACAATT CGCCTAGCCG ATAAATATCA AGATTACAAG GCGATTTTGG CCAAACACGG CGTACAGATC AGTCGCCAAC GGGTTGCCAA AGAATTACAT CACCTGTTTG CGAGCGATGA TGCCGATACT TTGCACTCAT TATTAGAGAA CGATCCCAAT GGCAAGCGTT TGACCCACCC CCAAAAAAGC TGGCGCACGG TCAACCTCGC CCACACCCTC GACGACCTCG ATGCCCGACT CGGCAATTTG GAATAG
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Protein sequence | MKKSTPSKRA LVLAGGGISG AVYEIGALRA IDDLLTTLSI NDFDMYVGTS AGSLISSCLA NGITTRELLR ILEGALPDAK RLQRDQILAL NLRGLIKRGR RLPRLLAQRA IETLRRPQDF APLDWAWKLL EGLPNGIYST NSLERYLRHF LTERGSNHFA ELQRELYIVA TELDSGDRAV FGEGNLRNVP ISAAVAASSA MPIVYEPVRI NGVDYIDGGV RGTASLDVAI DRGAKLIVCV NPLVAFDNRK HQLGSRIADA GIQAIGNQVF RTFIQAGLHY HIKKLRQQHP DVDIILIEPR ADDAIVFAEH VLHYDERMLL ARHGYESATI RLADKYQDYK AILAKHGVQI SRQRVAKELH HLFASDDADT LHSLLENDPN GKRLTHPQKS WRTVNLAHTL DDLDARLGNL E
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