Gene Haur_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0972 
Symbol 
ID5732858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1115160 
End bp1115861 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID641278104 
ProductTetR family transcriptional regulator 
Protein accessionYP_001543748 
Protein GI159897501 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.93446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAA AAGCCATCAG TAGAATGGTT AGAAGCAGGC AATCTATGGC AGCGAATCAA 
CCAAGCGATC ATGCTAGTTC GGTGGTACGT CCGTTGAAAG AACGCCAGCG TGAACAACGC 
GAGGCCATGA TTTTGGCCGC AGCCCACGCG GTGTTCATTG CCAAAGGCTA TCACGACGCT 
TCGATTGACG AGATTGCAGG CCAAGTTGGC ATTTCCAAGG GCGCGATCTA TCAACATTTT 
GCCAGTAAAG AGGATTTAGT TGAGGCCTTG ATTGCCCAAC AGATCAGCGA TTTTCTGGGC 
ATTTTGGATC GCCTACTCGC AGAAACAACC TCGGTTTGCA CTCGGCTTGA ACAGATTCTG 
TCCCACGCTT ATGGTGGCTT GCAGGGCAAA CACAGTGGTG TGTTGCTCGA ATTGCACCAT 
CGAATCGGCT TGCCCAATGC CGTGATTGAA AAACGTCCTC AGCTTCAATC GCGCGTTGAA 
CAAGCCATGA GCCGCCTCAG TCGCTTATTT GATGAGGGCA AAGCGACTGG CGAACTCAAT 
CCATGCATTC CAACGCCAAT TATGGTGGCC ACCTTTATTG GTTTGTTGTC ATTGCGTGGT 
TACGAGCAAT TAATCGCAAG CGCCCAATTC AGCCCTGCCG ACTTGATTCC CCATATTAGC 
CAGATCTTCT TTCGCGGCAT TGTCGCACCA ACTGGAAGTT AA
 
Protein sequence
MSRKAISRMV RSRQSMAANQ PSDHASSVVR PLKERQREQR EAMILAAAHA VFIAKGYHDA 
SIDEIAGQVG ISKGAIYQHF ASKEDLVEAL IAQQISDFLG ILDRLLAETT SVCTRLEQIL 
SHAYGGLQGK HSGVLLELHH RIGLPNAVIE KRPQLQSRVE QAMSRLSRLF DEGKATGELN 
PCIPTPIMVA TFIGLLSLRG YEQLIASAQF SPADLIPHIS QIFFRGIVAP TGS