| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0960 |
|---|
| Symbol | |
|---|
| ID | 5732846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1100821 |
|---|
| End bp | 1101360 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278092 |
|---|
| Product | sterol-binding domain-containing protein |
|---|
| Protein accession | YP_001543736 |
|---|
| Protein GI | 159897489 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3255] Putative sterol carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACC TCAGCACGAT AACCGTTAGT GATTACATTG CGACCGCCCT GCCGGAACAA
TTGGCAAGCC AAAGTGGTGG CTTGGAAGAT GCGACCTATG CAATTCAGTA TTTGGTTGAT
GGGACGGCCT ACGCGGTGAG CTATAGCGCT GGCCGCGGCG AAGTAGTCAA TGGCACGGTG
GAAAATCCAT TATTGACCGT GACCCTCGAC GAGCCAACCT GGCGTGGGGT AATTACCGAA
GAAACTGCCT CGGCAGATGC CTTGGTTAGC CCAGCCAAAA TGAGCGCCAG CCGCATGGAA
AAATTGCAAA ATCTCAAGGG CAAATTCAAC CTTGAATTGA CCAAAGCCGA TGGCAGCGTG
GCCTATTCAA CTACCACCTT CAACGGCGTT GATACCCCTG AAGTCACCCT CATGATGAAG
GCCGAAGATT ACGCCAAAAT CCTCAAGGGC GAACTCAATA GCCAAATGGC CTTTATGACT
GGCAAACTCA AATTCAAAGG CGACATGAAT TTCCTCATGA AGCTCGGCAC ACTCATGTAA
|
|---|
| Protein sequence | MADLSTITVS DYIATALPEQ LASQSGGLED ATYAIQYLVD GTAYAVSYSA GRGEVVNGTV
ENPLLTVTLD EPTWRGVITE ETASADALVS PAKMSASRME KLQNLKGKFN LELTKADGSV
AYSTTTFNGV DTPEVTLMMK AEDYAKILKG ELNSQMAFMT GKLKFKGDMN FLMKLGTLM
|
|---|
| |