Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0883 |
Symbol | |
ID | 5732784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1006915 |
End bp | 1007829 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278015 |
Product | GAF domain-containing protein |
Protein accession | YP_001543659 |
Protein GI | 159897412 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAATC CGTCTGAAAC TGATGTAGCC TTGACGGTGA TCAAACGTTT GCGCTGGCTG TGGCTTGGCT CGGCCTTGGT TTTATTGGTC GGTGTGGGCT TTTTATTGTG GGTTGGCACG GCCAAACAGC CATTTTCATT AGCAGTGGTA TTGTTATTTG CCGCTTGGTC GCTGATTTGG CTGTTGTTGA GTGCTTGGCT CTATCGTCAA ATTGCCCAAC ATCTGAATCG CACGATCTTG CCTGTGGTGC GCGATCATCC TTTGTTGAAC GAGCAAATTA GCCAAGCCAA AGCGGCCTTG TTGGCGGCGC AAGATCAATA TTCTTCCCAT ACCGCCCAGT TGATCGACTC GATTTTGCCC TTGGGTGTGC AGTTGGTTAG CGAAGATGAT GTTGAGCATT TGTTTCATAC GATCGTAACG ACCGCCAAAC AACTGGCCTC AGCAGATGCT TGTACCTTGT ATTTGCGCAC CTCAACCCAA ACCCTGCGTC CAGTTACCAT GCAAACTGAT TCGTTGAAGA TTAATTTGAG TGCTTTCGAT CAGCAATTGC CAATTCCGGC TTTGGCGTTG TACGATAATC AAGGCCAGCC GATTGTGCGC ACCATTACTG CGGCCACGGT GCATCGCGGG GTTTCGCATA ACGTGATCGA TGTCTATGGC AGCGATTCAT ATGATTTTTC TGGCCCGCAA GCCTTTGATA TGGCCATGAA CTATCATTCA ATGTCGTTGC TGACTGTGCC GCTGAAAGAT AGCACGACTG AGGTGATCGG CGTTTTGCAA TTGATCAACT GTATTGATCG AGCGCAACAT ACAATTGTGC CATTCAGCCC TGAAGTGCAG CAAAAAGTTG AAGTGTTGGC TAGCCTTGTC GCCGCCGCCT TGGTGGTCAA TGATAAGCAA TTACCCGATG TTTAG
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Protein sequence | MPNPSETDVA LTVIKRLRWL WLGSALVLLV GVGFLLWVGT AKQPFSLAVV LLFAAWSLIW LLLSAWLYRQ IAQHLNRTIL PVVRDHPLLN EQISQAKAAL LAAQDQYSSH TAQLIDSILP LGVQLVSEDD VEHLFHTIVT TAKQLASADA CTLYLRTSTQ TLRPVTMQTD SLKINLSAFD QQLPIPALAL YDNQGQPIVR TITAATVHRG VSHNVIDVYG SDSYDFSGPQ AFDMAMNYHS MSLLTVPLKD STTEVIGVLQ LINCIDRAQH TIVPFSPEVQ QKVEVLASLV AAALVVNDKQ LPDV
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