Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0453 |
Symbol | |
ID | 5732352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 530841 |
End bp | 531557 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641277579 |
Product | LmbE family protein |
Protein accession | YP_001543232 |
Protein GI | 159896985 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCA TCCTCTCTGT TTGGGCGCAC CCCGATGATG AAGCATTTGG CCCTGTTGGG GTGCTGGCCC AAGCCCATGC TGCTGGCTAT CGCACGGTCA TTATTACCGC AACCCATGGC GAACTAGGCC AAATTAGCCC TGAACTAGCA ATCAATCCTG AGAACTTAGG ATCAGTGCGT TTGGAAGAAC TGCATCAAGC CTGCCAAGCA ATTGGGGTTG ATCGAAGCAT CGTCTGGGAT TATCCCGATG GTGGTTTAGC GTTGGCCAAC GCCACCGAGT TGCGCGATAA GATTGTAGAA GTGTTGAATG CTGAGCAACC AGCCATCGTG CTGACCTTTG GGCCTGATGG AATTTATGGT CACCCCGACC ATATTGCGAT TAGTATGGCC ACAACCCAAG CTTTTGCCCA ATATTTGGCT TTGCACCCAA CGATTGAGCA GCCGCGCTTG TATTATCAAA GCGTTGCCCC AAATAGCCCG CGCTCAGTCA ACGCCGCCAG CAGCAATGAA TATCCCGACC CATTGCCAGC CACCACAATT ATCGATGTGA GCGAGTATGC CGATACCAAA CGGGCGGCTT TGGAAGCCCA CGCAACCCAG CGCCACGATT GGCAACAATT CCTTGACCAA GCCGATTGGT TTAATACGGT CTATCTCCAT CGCGTGTATC CTTCGTTCGG ATTGAACGAT CAGCCAGAAA CGACACTTTT TGCATGA
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Protein sequence | MPTILSVWAH PDDEAFGPVG VLAQAHAAGY RTVIITATHG ELGQISPELA INPENLGSVR LEELHQACQA IGVDRSIVWD YPDGGLALAN ATELRDKIVE VLNAEQPAIV LTFGPDGIYG HPDHIAISMA TTQAFAQYLA LHPTIEQPRL YYQSVAPNSP RSVNAASSNE YPDPLPATTI IDVSEYADTK RAALEAHATQ RHDWQQFLDQ ADWFNTVYLH RVYPSFGLND QPETTLFA
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