Gene Haur_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0453 
Symbol 
ID5732352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp530841 
End bp531557 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID641277579 
ProductLmbE family protein 
Protein accessionYP_001543232 
Protein GI159896985 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCA TCCTCTCTGT TTGGGCGCAC CCCGATGATG AAGCATTTGG CCCTGTTGGG 
GTGCTGGCCC AAGCCCATGC TGCTGGCTAT CGCACGGTCA TTATTACCGC AACCCATGGC
GAACTAGGCC AAATTAGCCC TGAACTAGCA ATCAATCCTG AGAACTTAGG ATCAGTGCGT
TTGGAAGAAC TGCATCAAGC CTGCCAAGCA ATTGGGGTTG ATCGAAGCAT CGTCTGGGAT
TATCCCGATG GTGGTTTAGC GTTGGCCAAC GCCACCGAGT TGCGCGATAA GATTGTAGAA
GTGTTGAATG CTGAGCAACC AGCCATCGTG CTGACCTTTG GGCCTGATGG AATTTATGGT
CACCCCGACC ATATTGCGAT TAGTATGGCC ACAACCCAAG CTTTTGCCCA ATATTTGGCT
TTGCACCCAA CGATTGAGCA GCCGCGCTTG TATTATCAAA GCGTTGCCCC AAATAGCCCG
CGCTCAGTCA ACGCCGCCAG CAGCAATGAA TATCCCGACC CATTGCCAGC CACCACAATT
ATCGATGTGA GCGAGTATGC CGATACCAAA CGGGCGGCTT TGGAAGCCCA CGCAACCCAG
CGCCACGATT GGCAACAATT CCTTGACCAA GCCGATTGGT TTAATACGGT CTATCTCCAT
CGCGTGTATC CTTCGTTCGG ATTGAACGAT CAGCCAGAAA CGACACTTTT TGCATGA
 
Protein sequence
MPTILSVWAH PDDEAFGPVG VLAQAHAAGY RTVIITATHG ELGQISPELA INPENLGSVR 
LEELHQACQA IGVDRSIVWD YPDGGLALAN ATELRDKIVE VLNAEQPAIV LTFGPDGIYG
HPDHIAISMA TTQAFAQYLA LHPTIEQPRL YYQSVAPNSP RSVNAASSNE YPDPLPATTI
IDVSEYADTK RAALEAHATQ RHDWQQFLDQ ADWFNTVYLH RVYPSFGLND QPETTLFA