| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0340 |
|---|
| Symbol | |
|---|
| ID | 5732250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 406921 |
|---|
| End bp | 407274 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641277464 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001543120 |
|---|
| Protein GI | 159896873 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000140808 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGA TTACCGTCGG TTCGCAAGCT GCGTTTGAGG TTGCTAGTGG CACACGCTTA
GTCAATGCTC TTGAAGATCA TGGTGTGGAT ATTTTACATC GCTGTGGCGG CAATGCCCGT
TGCACAACCT GTCGAGTTGA GTTTCAGACT GGCGAACCCC AAGCGATCAC CAAGGCTGAA
TCGTTTAAAT TGGCCGAGGC CAAGCTCACT GGGGTGCGTT TGGCATGCCA AATTCTCTGC
GAACACGATA TGCAGCTTCA ACCTTTACAA ACCTTGAGCG CATCGGGCTT GCCCGACCCT
GGGCCACGCC CGTCCGATGA ACTCACCCCA GCCCCTGAAT GGCTGAATCG TTAA
|
|---|
| Protein sequence | MPKITVGSQA AFEVASGTRL VNALEDHGVD ILHRCGGNAR CTTCRVEFQT GEPQAITKAE
SFKLAEAKLT GVRLACQILC EHDMQLQPLQ TLSASGLPDP GPRPSDELTP APEWLNR
|
|---|
| |