Gene Haur_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0247 
Symbol 
ID5732142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp288335 
End bp289198 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID641277371 
ProductMerR family transcriptional regulator 
Protein accessionYP_001543027 
Protein GI159896780 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGA TTGGTGAATT TTCGCGTTTG GCTCAAGTTT CGGTGCGGAT GCTACGCCAT 
TACGACAAAT TAGGCTTGCT CATTCCCAAC CAAATTGATC AATGGACTGG CTATCGTTAC
TACTCAGTTG AGCAATTGCC ACGGCTGCAT CGCATTGTGG CACTCAATGG CCTGGGGCTA
AGTCTCCAAC AAATCGGCGA ATTATTGAAC CACGATGATC TTTCGGCTGA TCAACTGCGT
GGGATGTTGC GCCTGCAAGA AGCCCGCTTA ACTGCTGAAC TGGCCAAAAA GCAAGCCCAA
CTAGCCGAAG TCAGTGCTCG CTTGGCCCAA ATTGAACATG AACAAGAGCC ATGGCCCTAT
GCCATGATGC TCAAATCGAC CGCTGCTGAG CCGATTGTCA GCATGCGAGC GATTGTACCA
AGCCTTGATC AAATGGGTTA TTACTGTCAT CGGCTTTATG CATCGCTGTA TCAACAAGTG
CAACAGCAGC GCATTCCAAT CCTTGCCCAA GAAATTACGA TCTATCACAA CGAGGAGTTT
ATCGAAACCG ATATTGGAGT CGAAGTAGCA GTCAGTTTGG CCGAGCACAA TATGGCTCAA
TTGCCCGATA GCAACATCAA GTTTCAAACC CTGCCTAGCC TCGAATTGGC CGCAACCCTC
GCTTTCGAAG GCAGTTTTAG CGAAATTCAC GCCGCCGCTT TGGCGCTGTT GGGCTGGGTT
GGCTTGCACA ACTACGAAAT GATTGGGCCA CTGCGCGAAT TTCATCGTTC AGGGCCAGCC
CACAATGCTC AAGGCGGCAT TCAAGAGCCA GCGGTAATTG AATTACAACT ACCAATCAAA
CTACGAGATA ATGAAAGGAA TTAA
 
Protein sequence
MFKIGEFSRL AQVSVRMLRH YDKLGLLIPN QIDQWTGYRY YSVEQLPRLH RIVALNGLGL 
SLQQIGELLN HDDLSADQLR GMLRLQEARL TAELAKKQAQ LAEVSARLAQ IEHEQEPWPY
AMMLKSTAAE PIVSMRAIVP SLDQMGYYCH RLYASLYQQV QQQRIPILAQ EITIYHNEEF
IETDIGVEVA VSLAEHNMAQ LPDSNIKFQT LPSLELAATL AFEGSFSEIH AAALALLGWV
GLHNYEMIGP LREFHRSGPA HNAQGGIQEP AVIELQLPIK LRDNERN