| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0196 |
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| Symbol | |
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| ID | 5732042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 231119 |
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| End bp | 232534 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277320 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001542976 |
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| Protein GI | 159896729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0256028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCGTC GCCTACTCAA AGATACTGCG CTGTATGCCC TAACTGGGGT GGCAACCAAA
ATGATCGGGG CATTATTGCT GCCCTTGATC ACGCGCTTGC TTAGCCCTGA ACTCTATGGC
AGCGTCGATT TGATTAGCCT TGTCGGTTTG TTTGCGATTG AGTTGGTGAC GCTCGGTAGC
GATTTTGCCT TAGCCCTGTA TTTTCATGAA GCCACGATTG AGCGGCGACG TTTGGTTGGC
TCGCTCTGGG TAGCACGGCT ACTTTTGGGC TTGCTGATCG CATTGATTGG CCATTTGCTT
GCGCCATATT TGGCCTGGCA ATTGCTGCAA CGCAGCGATG CCCAAACAAT TTTGGCCTTG
CGGCTTGGTT TGTGGGGGCA ACTCGCCAAC GGCATCATCG GTTTGTGGTT CACAACCCTG
CGTCAAGAGA GCAAAGCACT GCGTTTATTT GGCCTGACGG TGCTGCGAGT AGCCTCGACC
GCGTTACTGA CAATTGGCTG GATGTTGCAG AGTAGCCAGC GGTTGAGTGC CTATTTTGGG
GCGATGCTGC TAGTTGATAG TTTGCTGGCG CTCGGCTTGA CCCTGCAAAT GCGTCGGCAA
CTGGGCTGGC CTGATTGGCG CTTACTAAAA ACGTTGTTGG GCAAAGGTTT AGGTTTTTTG
CCACGCTCGA TCTATTTCGT AGCGATGACC TTGATCAATC GCCAGATTTT GCTGCACTTT
GGCTCGTTGG AGCAAATTGG CCAGTATGCA GCGGCAACCA AAATTAGCTT TATCGTATGG
ATTGTGATTA GCGCTGCCAA TCAGGCTTGG TTGCCCTATA GCCTGTCGAT TGCTAGCACG
CCGACCGCCA ACGCCAATTA TCGCCAATAT CTCACCAGCT ATACGATGTT GATGGGTGCT
GCCACGACTG GCTTAGGCTT ATTTGCCCCT GAATTGTTGC GACTGTTGAC CACAGGCGAT
TATCTGCCCG CAGCGCCAGC GGTTGGTTGG TATGCGCTGA ATTTAATGGC GATTGGCTTG
TTGACGGTGG CGGCAACCGG CCTGACGATC ACCAAAGCGA CCGCTGTTTT AGGCCAAACC
AGTTTATTGA CCGCTGGGTT AAATGTTGGC TTAGCGATTG TGCTTGTGCC ATGGCTGGGC
TTGGTTGGGG CGGCAATTGC GGCGGCAGGC GATCAACTGA TCGCGGCGTG GTTGGTGTAT
CGCGCGGCTC AAAAGCGCTA TCCGATTGAT TTTGATGGTA AGGCGGTGAT CGGTTGGCTG
AGCCTGACGA TTGCCTGCGT GGCCTTGGCT AGTTGGTTGC CATTGACCTT GAGCTGGCCA
TTAATTGGGC TGAAATTGCT GATTGTTGGC GTGTGGTTGG GCTGCGTTTG GCGTTGGGGT
CAGCCCAAAA TGCTGCTCTC AGTACTTAAA CGATAA
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| Protein sequence | MSRRLLKDTA LYALTGVATK MIGALLLPLI TRLLSPELYG SVDLISLVGL FAIELVTLGS
DFALALYFHE ATIERRRLVG SLWVARLLLG LLIALIGHLL APYLAWQLLQ RSDAQTILAL
RLGLWGQLAN GIIGLWFTTL RQESKALRLF GLTVLRVAST ALLTIGWMLQ SSQRLSAYFG
AMLLVDSLLA LGLTLQMRRQ LGWPDWRLLK TLLGKGLGFL PRSIYFVAMT LINRQILLHF
GSLEQIGQYA AATKISFIVW IVISAANQAW LPYSLSIAST PTANANYRQY LTSYTMLMGA
ATTGLGLFAP ELLRLLTTGD YLPAAPAVGW YALNLMAIGL LTVAATGLTI TKATAVLGQT
SLLTAGLNVG LAIVLVPWLG LVGAAIAAAG DQLIAAWLVY RAAQKRYPID FDGKAVIGWL
SLTIACVALA SWLPLTLSWP LIGLKLLIVG VWLGCVWRWG QPKMLLSVLK R
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