Gene Dshi_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4213 
Symbol 
ID5714742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp59994 
End bp61394 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content67% 
IMG OID641277108 
Productcobyrinic acid ac-diamide synthase 
Protein accessionYP_001542404 
Protein GI159046736 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCA CAGGCAAGAC CCCCCTACCC CCATACACCA ACCTGGACCC CGAAGCCGCG 
GCGCGCAAGC TGTCGGATCC GATCGACACC GCCCGCTTCG CCAAGGCCGC CGCGTTCGCC
GCGAAAGGCC GCGACGACCT GGCCCGGCGC GGCTATGCCC CGGACGGCCA GAAGCGCCTG
CGCCGGTTCT CCACATGGGA GGTCTGCCGC TACCTCATCC CCGTCGCCCC CGCCCATTTC
CGCCGCGTCC TCAAGGCCCA TCCGGACCTG CCCCAGGGCA CCGGCGAGGG CGGCTCGAAA
TGGTTCACCC TCGAAGAGGT GCTGACCCTG CGCGACCATT TCGATGCCGA GGGGGTCGCC
ACCCGCGAAT ACCGCCCCTG GCGTCCCGAG GGCCTGCCGG CCAAGGTCAT CGCCGTGGCG
AATTTCAAGG GCGGGGTCGG CAAGACCTCC ACCGCCGCAC ACCTTGCCAT GTCCGCCGCG
CTGGATGGTT ACAAGGTGCT GGTCGTGGAT CTCGACAGCC AGGGCTCCAT GACCTCGATC
ATGGGCGGCA AGGTCGCCGA CGAATGGCAG ACCGCCTTCC CGCTCATCGC CAAGGACTAC
GCCCAGGCGG TGCAGGCCGA AAACACCGTG CGCGCCGCCG CGGGCCAGCC GCCCCTGCCC
TTCGACGAAA CCCTGACCGA GGCCCTGAAG GTTTCGCCGC GCGACGTGAT CCAGTCCACC
CACTGGCCCA ATATCGACCT GATCGGCGCG CAACTGAACC TTTATTGGGC CGAATTCCAG
GTCCCGGTCT GGCGGATGCA GCTGCGCTCT TGGCCGCTCT GGGACGGGTT AACAAACGCT
CTCGACAGCG CGCGCCTGCT TGACGAATAC GACATCGTCC TGCTCGATAC TCCGCCCGCG
CTCGGGTACC TGACGATCAA CGCGCTCGCC GCCGCCGACA TCCTTCTGGT CCCCCTGGGC
GCCTCGTTTC TCGAATTCGA CAGCACGGGC CGCTTCTTCG ACATGCTCTA CTCGACCTTC
GCCAGCATCG AGGACGGCGA GAACGCCGCC CGCCGCCGGG ACGGGCTGCC CGAGATGCGG
TTCGAATGGG ACGCGGTGCG CGCGCTGATC ACCCGGTTCG ACGCGAACCA GCAGACCGAT
CTGGCCAACG TGATCCAGGC CTATTTCGGC GACTTCATGA CCACCTACCG GCAGGATTAC
ACCGCCATGG TCGGCCAGGC GGGCGAGCAG GTGAACGGCA TCTACGAGGC GGATTACCGT
GATTTCAACC GCGACACCTA TATCCGCGGG CGCGAGACCT TCGACCGGAC CTGGGCCGAG
GTGAAGGACA TCCTGCTCGG GACCTGGTGG CGCGATTTGC AGATGGCCGA GGCGGCACGA
CAGGAGACAT CCCATGGCTA A
 
Protein sequence
MPPTGKTPLP PYTNLDPEAA ARKLSDPIDT ARFAKAAAFA AKGRDDLARR GYAPDGQKRL 
RRFSTWEVCR YLIPVAPAHF RRVLKAHPDL PQGTGEGGSK WFTLEEVLTL RDHFDAEGVA
TREYRPWRPE GLPAKVIAVA NFKGGVGKTS TAAHLAMSAA LDGYKVLVVD LDSQGSMTSI
MGGKVADEWQ TAFPLIAKDY AQAVQAENTV RAAAGQPPLP FDETLTEALK VSPRDVIQST
HWPNIDLIGA QLNLYWAEFQ VPVWRMQLRS WPLWDGLTNA LDSARLLDEY DIVLLDTPPA
LGYLTINALA AADILLVPLG ASFLEFDSTG RFFDMLYSTF ASIEDGENAA RRRDGLPEMR
FEWDAVRALI TRFDANQQTD LANVIQAYFG DFMTTYRQDY TAMVGQAGEQ VNGIYEADYR
DFNRDTYIRG RETFDRTWAE VKDILLGTWW RDLQMAEAAR QETSHG