| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4198 |
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| Symbol | |
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| ID | 5714699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 44976 |
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| End bp | 45887 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641277093 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001542389 |
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| Protein GI | 159046721 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.982202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC GCCAATTGCA AACCCTCGTC GCCGTGGCCG ATACCGGCAG CTTCGCCGCC
GCCGCCGGGG TGGTGAACCT GACGCCCTCC GCGATCAGCC AGCAAATTCA ATCCCTTGAG
GCCGAGATCG GCGCGCAGCT CTTCGACCGG AAAAAACGCC CCCGGCAGCT CAACGCCCAG
GGCGAGGAAC TGGTCCGCGC CGCCCGCAGC GTGGTGCAGA CCCTGACCGA GGCGCGCATG
ACCATCGCGG GCGGGCGCAC GGCGGGGGTG CTCAAACTCG GGGCCATTCG CACGGTTTCC
ATGCGCCTCG TGCCCGAGGC CCTGCGCGGC ATGCGCGGCC GCTACCCGGA TCTCGGCTTC
GAGATGACGG TGGGCATGTC CGAACGGCTG ATGGCGGACG TGGCCGCGGG CCGCCTCGAT
GCCGCCCTGG TGGCCGAGCA TGTGGGCGTG CCCGCCACCC TGTCCTGGAG CCCGGTTCTC
AACGAACCCC TGGTCATCAT CGCCCCGCCG CAAGAGGCCT GGCGCAGCGA GGTGTCGCTC
CTGCGCGATC TGCCCTTCAT CCGCTACGCG ACCGACGTGC CCCTCGCCCG ACAGATCGAG
ACCGAGCTTT CGGGCCTCTC CATCGTCCCG CGGGAGGTGG CCGTGGCCAA TACCATGCCC
GCGGTGGTGG GGCTGGTGCA GGCGGGGCTC GGCGTCGCCG TGGTCCCCCG GATCGCCACC
CTGCACGGCG GGCCCGCGCT CCACTGCCGC CCGTTCCGCG ACGGCGCGAT CACCCGGCGG
GTCGGCCTGG TGCAACGGCA GGTCTCCTCC CGCTCCCGGG TGCTGACCGA ACTGCGCGAG
ATCCTGTCCG AAGTGGCCCT GCATCGCGGC CTCGTGCTGG ACCCGACCCC CGGACGCCCC
GGCGCGGCCT AG
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| Protein sequence | MDLRQLQTLV AVADTGSFAA AAGVVNLTPS AISQQIQSLE AEIGAQLFDR KKRPRQLNAQ
GEELVRAARS VVQTLTEARM TIAGGRTAGV LKLGAIRTVS MRLVPEALRG MRGRYPDLGF
EMTVGMSERL MADVAAGRLD AALVAEHVGV PATLSWSPVL NEPLVIIAPP QEAWRSEVSL
LRDLPFIRYA TDVPLARQIE TELSGLSIVP REVAVANTMP AVVGLVQAGL GVAVVPRIAT
LHGGPALHCR PFRDGAITRR VGLVQRQVSS RSRVLTELRE ILSEVALHRG LVLDPTPGRP
GAA
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