Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4055 |
Symbol | |
ID | 5714584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | - |
Start bp | 114525 |
End bp | 116654 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641276967 |
Product | thiol:disulfide interchange protein DsbD 1 precursor |
Protein accession | YP_001542263 |
Protein GI | 159046593 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein [COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATCGATT GCCTTTTGAT CCTGCGACGG GTTTTGCTTA TTCCCTTCGT GCTCCTGGCC GTTGTCTCTG GAAGTGTCGC GGCAGCAACC TCTGCTGAAT ACCAGAGCGC GCCACTCACC GCGCATCTCA TTAGTGTACA GGACGGCGTT CCCGAGAACA CACAGACTCT GTCAGCCGGG CTTCACCTTC AACTGAACGA AAACTGGAAG ACCTATTGGC GGTCGGCGGG CGAGGTGGGA ATACCGCCTT CGGTCGAATG GAGCGGTTCC GAAAACGTCG CAGATGTCGA ATTCATGTGG CCCGCCCCGA CGCGCTTCAC CGCCTTCGGC ATCGAAAATT TTGGTTATGC GGGTGAAGTC GTCTTTCCGC TGCGCATAAC GCTCAAAGAT CCCGGCGCAC CTGTGACTCT TTCCGCGCAG GTCAAACTGC TGGTGTGCTC CAATGTCTGT GTCCCGGAAG AGTTTGACCT GTCACTTCGC CTCGGACGGG GCAACGTCAT CGACAGCACT TCGGCTGGGC TGATCGGTAC GTTTTCCGAG CGCGTCCCCG AAGGGGCCAA GACGAGCGGC GTCAGCGAGG CAAATGCCTT CATCGACGAA GACCTCACGG AGTTGATCGT CAGCCTTCGC GTCGATGAAC CACTCCAGTC GCCGGATGTG TTTCCCGAAC TGGGTATGGG TGTTGCGCTT GGCAAACCCG ATATCCGTTT GGGAGAAGAG GATCGTTTGC TTTGGGCGCG CTTGCCGATC CTCTCGTCGA ATACGGATGT GACAGTGGCT CCGTCGATTA CCGTCACCGA CGGCGAGAAC CGGGCCTTCA CGATCATCGC GGATCGCGTG GCGCAAGGAA TAGCACCACC CTTTGAACTG GCCGCCACGA CACCGGACAT GATGGAACTG ATCTGGATTG CCGCGATCGC GCTGCTGGGC GGATTGATCC TGAATGTGAT GCCCTGCGTG CTGCCGGTGC TGTCCATCAA GGTGTCGTCT GTGCTCAAAC ACACCGATCA CGACACAACC CGTGTCCGGT TCGGTTTCGT CGCTGCCAGC GCCGGCATCA TGACGTTCAT GTGGGGTCTG GCGCTCGTCC TCTGGGCGCT CCAGACGGCA GGCCTCAGCG TCGGGTGGGG TTTGCAGTTT CAAAGCCCGC TGTTTCTTGC GGCGATGATC GCTGTCCTGC TCGTCTTTTC GGCAAATCTG TTCGGAGCGT TCGAGTTCGC CCTTCCACAC GGCATGCAGA CGCGGCTTGC AGGGGCCGGA GGACGCAACG GGTATTCCGC CGACTTTTTC ACTGGCATGT TCGGTGCCGT CATGGCGACG CCTTGTTCGG CACCGTTCCT CGGCACCGCG GTGGCCTTTG CTTTGGCCGG GCGTGGCGTG GACATCCTCA TCGTCTTTAC GAGCCTCGGG CTCGGCCTCG CCCTGCCCTA TCTCGTCATC GCCGCGTTCC CGCGTCTGGT CGCATTCATG CCCAAGCCTG GTCGATGGAT GCTGATCATC AAAAGCGTCA TGGGGGTTTT GTTGCTTGCA ACCGCCGTGT GGCTGTTCTG GGTGCTCGAC GGTGTCGCCG GGCTTGCGTC TGTCATCGCG GTCGCGGCGT TGTCCGGTCT CGCCGTTCTG ATACTATCTC TCCCGAATGT GCAGTCCCAA TTCAGGTGGT CTATTGCCAT AGCCAGCCTT GTCCTGGCCA TTGCCGCAGG TCCTCTCTTG CAGCAATCAG CACCTGCGCG TTCGACGCCG CAGTTGGCAA TGGCTTGGAT CGCATTTGAT CGTTCGGAAA TAGCGAAACG CGTGTCCGCA GGAGAGGTCG TTTTTGTCGA TGTGACCGCT GACTGGTGTC TGACTTGCAA AGCGAACAAG ACACTTATCA TCGATCGGGA GCCAGTCCGG AGCGCGCTTG AAGCGCCTGG AGTCACGGCG ATGCAGGCAG ATTGGACACG CCCGGACACG CGCATTTCCC GCTACCTTGA GAGTTTCGGC AGATACGGCA TCCCCTTCAA TGCCGTCTAC GGACCATCGG CACCGAACGG CATTGTGCTG TCCGAATTGC TAAAAACCGA GGACGTGATG AACGCCTTGG CGCAAGCCAG TGGTCGGGAT GTTTCCGCAA AGGTTGCCGG ACAGGAGTGA
|
Protein sequence | MIDCLLILRR VLLIPFVLLA VVSGSVAAAT SAEYQSAPLT AHLISVQDGV PENTQTLSAG LHLQLNENWK TYWRSAGEVG IPPSVEWSGS ENVADVEFMW PAPTRFTAFG IENFGYAGEV VFPLRITLKD PGAPVTLSAQ VKLLVCSNVC VPEEFDLSLR LGRGNVIDST SAGLIGTFSE RVPEGAKTSG VSEANAFIDE DLTELIVSLR VDEPLQSPDV FPELGMGVAL GKPDIRLGEE DRLLWARLPI LSSNTDVTVA PSITVTDGEN RAFTIIADRV AQGIAPPFEL AATTPDMMEL IWIAAIALLG GLILNVMPCV LPVLSIKVSS VLKHTDHDTT RVRFGFVAAS AGIMTFMWGL ALVLWALQTA GLSVGWGLQF QSPLFLAAMI AVLLVFSANL FGAFEFALPH GMQTRLAGAG GRNGYSADFF TGMFGAVMAT PCSAPFLGTA VAFALAGRGV DILIVFTSLG LGLALPYLVI AAFPRLVAFM PKPGRWMLII KSVMGVLLLA TAVWLFWVLD GVAGLASVIA VAALSGLAVL ILSLPNVQSQ FRWSIAIASL VLAIAAGPLL QQSAPARSTP QLAMAWIAFD RSEIAKRVSA GEVVFVDVTA DWCLTCKANK TLIIDREPVR SALEAPGVTA MQADWTRPDT RISRYLESFG RYGIPFNAVY GPSAPNGIVL SELLKTEDVM NALAQASGRD VSAKVAGQE
|
| |