| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4009 |
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| Symbol | |
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| ID | 5714538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 77303 |
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| End bp | 78163 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641276921 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001542217 |
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| Protein GI | 159046547 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.671239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA TCAGGTATTT TTTGGCTGTC TGCCAGCATC GCAACTTCAC CCATGCCGCC
AGTGCCTCAA ATGTTTCCCA ACCGTCCTTG ACGACCGCGA TCAAGAAACT TGAACACGAG
CTCGGGGGTG ATCTGTTTGT CAGGGACCGC GCGGGATGCA GGTTGACGGC ACTCGGAAAG
CTAATGCAGC CAAGGCTACA GAAAGCGCAT GACGAAACGC AGGCAGCTAA GGCAGAAGCC
GTCCGCCACA CGCGACTAGA GCGGGTTCCT ATTTCTGTCG GTGTTGGCGA AACGATTGGT
CACAACCGGA TTTCAGCCGC CGTGGAACGC TTCCGTACAC GATTGCCGCA GGCCGAAATA
GAGTTGATCG TGGCGTCTAC CTCCAAGCTT CTGGCCGGAT TGCGAGAGGG TGAATTTGAC
GTCGTTGTCA CAGCGGCAAC TGTCAGTGAA AACCTCTATC GAATAGACCA GCTCTATGAC
GAGGCCTATA AGGTTGTGGT GTCCAAGTCG CACCCGTTGT CTGGACGAAA CGCTATTTCT
CTTTCGACAC TCGCTGAAAC TGACATGCTC GATCGACCCA ATTGCGAAAT GCGCGATGCG
TTGCATCGGG CATGTGCAGA CCAAGGTCAC GAACTCTACG CGGCCTATCG GTCAAATCGC
GTGGATTGGT TAGTCGAACT CGCGCGGCAG GGATTAGGCG CGGTGATTTT GCCAACCACG
GCAATTCCAG CAGATAGGGA CCTCGTTTCG ATACTCATCG ACGGCCTTGA AATTTCGCGA
ACTGTTTCTG CTCTTCGTTA TCGGCACCAA ACGACGAGAC CAGAGACAAA TGATCTGATC
CGTGAGATTG CGCGTGTGTA G
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| Protein sequence | MNQIRYFLAV CQHRNFTHAA SASNVSQPSL TTAIKKLEHE LGGDLFVRDR AGCRLTALGK
LMQPRLQKAH DETQAAKAEA VRHTRLERVP ISVGVGETIG HNRISAAVER FRTRLPQAEI
ELIVASTSKL LAGLREGEFD VVVTAATVSE NLYRIDQLYD EAYKVVVSKS HPLSGRNAIS
LSTLAETDML DRPNCEMRDA LHRACADQGH ELYAAYRSNR VDWLVELARQ GLGAVILPTT
AIPADRDLVS ILIDGLEISR TVSALRYRHQ TTRPETNDLI REIARV
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