Gene Dshi_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3919 
Symbol 
ID5714448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp145798 
End bp146166 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID641276832 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001542128 
Protein GI159046457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.663613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCCAA GCAACTACAG CGATGAGTTC AAGCGCGACG CGGTGCATCA GATCACGGTT 
CGCGGGTATC CTGTGCGAGA GGTGTCCCGG CGTTTGGGCG TCAGCACGTA TTTTCTTTAC
AAGTGGCTGA AGCTGTTCGG GGAACCCGTC TCAAACGCGG ACGTGGACCA TGGGGCCGAG
AACCGGCGCC TGAAGCGTGA GCTGGCTCGC GGGACCGAGA AGCGCGACAT CCCAAAAAAG
CAATGGCGTA CTTCGCGCGC GAGTCCCAAT GAAGTACGCC TTCATCCGGG CGCATCGCGC
AGAATTCGGC GTCCGGGCCA CGTGCCGGGT GCTGCGGGTC CATTTCTCCG GCTTCTTTGC
CTGGCTTGA
 
Protein sequence
MGPSNYSDEF KRDAVHQITV RGYPVREVSR RLGVSTYFLY KWLKLFGEPV SNADVDHGAE 
NRRLKRELAR GTEKRDIPKK QWRTSRASPN EVRLHPGASR RIRRPGHVPG AAGPFLRLLC
LA