| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3905 |
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| Symbol | |
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| ID | 5714434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 132871 |
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| End bp | 133992 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276818 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001542114 |
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| Protein GI | 159046443 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA TCACATCACA GATCGCGCGC TGGGGTGACC TGATCGAGGG GCTGCCGGCC
TTCTTGGCCC CGGCGGCGCT GCTTCTGGCG GCCGTGGTCG CGGCCCTCCA GCTGCACGCG
CTGGCCTTCG CGCTCCTGTC CCGTTTCACC AAGACGAATT GCGGCGTGGT CGGCTCCCTC
GCCGAGCGTG CCCGACGCCC GTTGCGACTT GCGTTCATCC TTGCCGCACT GGCCATCACG
ATCCCACAAA TCGGCCTGCC CTACAGATGG GAGAGCCGCT TGGGCCATCT CTTTCTTGTC
CTTCTCATCG TTCTTGTCGG CTGGACCGTT ATCATTCTGA CGAGCCACTT CTCCGATCGG
GCAATTCGCC GTCACCGACT GGATACGGAC GACAACCTTC AGGCGCGCAA GTTCGTCACT
CAAGTCCGTG TCCTGAAGCG CACGGCCAAC ATCGTCTTCG GCATTCTGAC CGCCGGCGCG
GTTCTGCTGA CCTTTGAAAG CGTGCAACGC TACGGCGTCA GCCTGTTTGC CTCGGCAGGG
GCGGCGGGCC TGATCCTGGG CTTCGCGGCG CGCCCCGTGC TTGCGAACCT GATTGCGGGT
ATCCAGATCG CCATCACCCA ACCGATCCGG CTGGATGACG TGGTAATCGT CGAGGGAGAA
TGGGGTTGGA TCGAAGAGAT CTACGCCACC TATGTCGTGG TCCGCATCTG GGATTGGCGG
CGCATGGTCG TGCCGCTCAG CTACTTCATC GAGAAACCCT TCCAGAACTG GACCCGTGAA
AATGCGTCGA TCATCGGCGC GGTCTATTGG TACATGGACT ACACCGTGCC CATCGCCGAA
ATGCGCGCCA AGCTTGAAAA GACCGTAGAA AACTCGCCGC ACTGGGATGG CCAGGTCGTG
AACCTGCAGG TGACCGACAC CGACAAGGAC ACCCTGCATA TCCGCGGACT GATGAGCGCG
CGCACATCCC CCCAAGCCTG GGATTTGCGC TGCGAGGTGC GCGAGAAGTT GATCGCGTGG
CTGCAAGCCG AATACCCCGA AGCCCTCCCG CGCCTCCGCG GGGAGTTGGA AATGCGCCCC
GAACGCGCAT CCGGATCGCT CGAGCAGGCC GACGCGGCTT GA
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| Protein sequence | MEEITSQIAR WGDLIEGLPA FLAPAALLLA AVVAALQLHA LAFALLSRFT KTNCGVVGSL
AERARRPLRL AFILAALAIT IPQIGLPYRW ESRLGHLFLV LLIVLVGWTV IILTSHFSDR
AIRRHRLDTD DNLQARKFVT QVRVLKRTAN IVFGILTAGA VLLTFESVQR YGVSLFASAG
AAGLILGFAA RPVLANLIAG IQIAITQPIR LDDVVIVEGE WGWIEEIYAT YVVVRIWDWR
RMVVPLSYFI EKPFQNWTRE NASIIGAVYW YMDYTVPIAE MRAKLEKTVE NSPHWDGQVV
NLQVTDTDKD TLHIRGLMSA RTSPQAWDLR CEVREKLIAW LQAEYPEALP RLRGELEMRP
ERASGSLEQA DAA
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