| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3856 |
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| Symbol | |
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| ID | 5714385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 62250 |
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| End bp | 63425 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641276769 |
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| Product | nuclease |
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| Protein accession | YP_001542065 |
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| Protein GI | 159046394 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.465439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC GCAAACGGCT CACCCCCGCG CAGCCCGGCT TTTTGGAAAC CAAATCCGCA
GGCGCCGACC CCGGCCCCGG CCTGACCCCC GGTTTCGCCG CGCAACAAAC GCCCGTGGCC
CATACGCCCC CCGCCCCGCC GCCCGCACCC CCCATCGCCC AGGTGGCCCG CGACAGCTCC
GCCTCCGCGG CCCTGGCCGA GGTCTCGGCA GAGCTGGAAA GCGCTCGCGC CGAGGGCCGG
CTGATCCAGG CCCTGCCCCT GCACTCCATT CGCCGCGATC ACCTGGTGCG CGACCGGCTG
CTGGTGGACC CCGACGAGAT GATCGTGCTC AAGCAATCCC TGCGCAGCCG CGGCCAGCAG
ACCCCGATCG AGGTGGTCGA TCTCGGCCCG GAGGCCGAGC CCCGCCGCTA TGGGCTGATC
TCCGGCTGGC GGCGCCTGAC CGCCCTGGAC GAGCTGCATG GCGGCACCGG CGAGGCCCGG
TTCGGCACGG TCCAGGCGAT CCTGCGCAGC CCCGAGACCG CCGAGGCCGC CTATACCGCC
ATGGTCGAGG AAAACGAGAT CCGCGTTGCG CTGAGCCCCT ATGAGCGCGC GCGCATCGTC
GCGAAATCCG TCGAACAGGG GGTCTTTCCC AGCACGAAAC AGGCGCTCCA GACCCTGTTC
GCCGCCGCGT CACGGGCCAA GCGATCCAAG ATCGGGTCGT TTTTGCCCGT GGTCGCGGCG
CTGGACGGGG TGCTGCGCCA TCCCGCGGCC CTGACCGAAC GGCTGGGCCT GCGGCTGTCG
AAGCTGCTGG AGGACGATCC GGAGCTGGGC CGCGACTGGC GGGTGCGCCT GCGCAAGGCC
GAGATCGAGG ATGAGCCCGC CGCCGAGATC GCCTGGCTGG AGGCCGCGGC GGCCGAGGCC
GAAGCGGGCC CGGGGGCGTC GGCGCAACCC GCGTCGCCCC CTGAGACGGG CACTCGGACA
GCCCCCGCGG CGGCGCCGGA CACACCGCCC GCCCCGCCTG CCCCGTCCGC GGCGAAACCG
GCCACGCCCG CGCCGGAGGG TGCCCGGGAA ATCATCAAGG GCGTCTATCT CGAACAGGGC
GGCGGCTTCA TTCACCAGAC CCTGACCCTG TCGGGGCCCA AGGTGGATGC GGCCTTCAAG
GCCCGGCTGA TCGCCTGGCT CCAGGACCAG TCCTGA
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| Protein sequence | MAKRKRLTPA QPGFLETKSA GADPGPGLTP GFAAQQTPVA HTPPAPPPAP PIAQVARDSS
ASAALAEVSA ELESARAEGR LIQALPLHSI RRDHLVRDRL LVDPDEMIVL KQSLRSRGQQ
TPIEVVDLGP EAEPRRYGLI SGWRRLTALD ELHGGTGEAR FGTVQAILRS PETAEAAYTA
MVEENEIRVA LSPYERARIV AKSVEQGVFP STKQALQTLF AAASRAKRSK IGSFLPVVAA
LDGVLRHPAA LTERLGLRLS KLLEDDPELG RDWRVRLRKA EIEDEPAAEI AWLEAAAAEA
EAGPGASAQP ASPPETGTRT APAAAPDTPP APPAPSAAKP ATPAPEGARE IIKGVYLEQG
GGFIHQTLTL SGPKVDAAFK ARLIAWLQDQ S
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