| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3855 |
|---|
| Symbol | |
|---|
| ID | 5714384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009956 |
|---|
| Strand | + |
|---|
| Start bp | 60736 |
|---|
| End bp | 62127 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641276768 |
|---|
| Product | cobyrinic acid ac-diamide synthase |
|---|
| Protein accession | YP_001542064 |
|---|
| Protein GI | 159046393 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.743489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGG ATCCGGCAGA GCAGCAGCCC CCCTATTTCA ACATCGACCC GGACGCGGCT
CTGGCCGAAC TGGGGCCGCC CACGGACAGC GCGGGCTTTG CCGCCATCGC CGAGGCCTGC
GCACGCGGCC GCACGGACCT CGCCTCAAGG GGGCTGAACG AAGCGGGGCG CAAGGAGCTG
CGCCTTTTCT CCACATGGGA GATCACCCGC TACCTGATCC CCGTCGCCCA GGCCCATTTC
CGACGCGTGC TGAAACAGAA CCCCGACCTG CCCCAGGGCC GCAGCGAAAC AACCGGCGGC
GCCAAATGGT TCACCCTCGA CGAGGTGCTG ACCTTGCGCG CGCATTTCGC CGCCGGGGGA
TCGAAGGCCA AAGAATACCG CCCCTACCGC CCCGAGGGGC TGCCCGCCAA GCTTGTCGCC
GTGGCCAATT TCAAGGGCGG GGTGGGCAAG ACCTCCACCG CCGCGCATCT GGCGATGTCC
GCCGCGCTGG ACGGCTACAA GGTGCTGGTG CTCGATCTCG ACAGCCAGGG CTCCATGACC
TCAATCTTCG GCGGCCAGGT CGCCGATGAA TGGGCCACGG TCTTTCCGCT GCTGGCGCGC
CACTACGCCC GGCACCTGCG GGGCGAGAAC CAGCGCCGCA TGGACAGGGG CGAGCCGCCC
ATCCCCTTTG ACGACACCCT GTCGGAGGCC CTCGATGTCA CGGCGCAGAG CCTGATCCAG
CCCACCCATT GGCCCAATAT CGACCTGATC GGTGCGCAGC TGAACCTCTA CTGGGCCGAG
TTCCAGATCC CCGTCTGGCG GATGCAGGCG CGGACCTGGA AGCTCTGGGA TGCGCTCACC
GAAAGCCTGG AGGCGGACGG CATCCTCGAC GCCTATGACC TGGTGTTCAT CGACACGCCC
CCGGCCCTTG GCTACCTGAC GATCAACGGG CTTGCGGCCT CGGATATCCT TCTGGTGCCC
ATGGGGGCCT CGTTCCTGGA ATTCGACAGC ACGGGGCGGT TCTTCGACAT GCTCCATTCC
ACCTTCCACT CCATCGAGGA AGGCGAGAAC ATGGCCGCCC GCGCCCTCGG CCGGGACGAG
CTGGCGTTCG AATGGGACGC GGTCCGCGCG GTCGTCACCC GCTATGACGG CGCCCAGCAG
GCGGAGCTTG CCGGGCTGAT GCAGGCCTAT CTCGGTCGCA CCCTCAGCCC CCACCGGCAG
GATTTCACCG CCCTGATCGG TCAGGCAGGC GAGCAGGTTT CGGGCATCTA CGAGGCCGAT
TACCGCGACT TCAACCGCGA GACCTATGTC CGCGGGCGCG AGACCTTCGA TGCGACCTAT
GCCGCGTTCA AGCGGCTGCT CATGGGCGTC TGGCGGCGCG AGGAACTGGC CGCGCGGGAG
CGGGCGGCGT GA
|
|---|
| Protein sequence | MARDPAEQQP PYFNIDPDAA LAELGPPTDS AGFAAIAEAC ARGRTDLASR GLNEAGRKEL
RLFSTWEITR YLIPVAQAHF RRVLKQNPDL PQGRSETTGG AKWFTLDEVL TLRAHFAAGG
SKAKEYRPYR PEGLPAKLVA VANFKGGVGK TSTAAHLAMS AALDGYKVLV LDLDSQGSMT
SIFGGQVADE WATVFPLLAR HYARHLRGEN QRRMDRGEPP IPFDDTLSEA LDVTAQSLIQ
PTHWPNIDLI GAQLNLYWAE FQIPVWRMQA RTWKLWDALT ESLEADGILD AYDLVFIDTP
PALGYLTING LAASDILLVP MGASFLEFDS TGRFFDMLHS TFHSIEEGEN MAARALGRDE
LAFEWDAVRA VVTRYDGAQQ AELAGLMQAY LGRTLSPHRQ DFTALIGQAG EQVSGIYEAD
YRDFNRETYV RGRETFDATY AAFKRLLMGV WRREELAARE RAA
|
|---|
| |