| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3827 |
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| Symbol | |
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| ID | 5714356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 34493 |
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| End bp | 36529 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641276742 |
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| Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
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| Protein accession | YP_001542038 |
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| Protein GI | 159046367 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases
[COG2030] Acyl dehydratase |
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| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.145671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC TCGACGTCCA AAGCTTCGCG GCCGGCCACT GGATCGCCCC CGATGCCGAT
GCCCGGATGA TCGCGCATGC GGTGACCGGC GCCCCCCTGG CACGGGCGGG CAACGGCGCG
CTGGACGTGC AGGCCATGCT GGACTACGCC CGCGACACCG GCGGCCCGGC CCTGCGCGCG
CTGACCTTCC ACGACCGCGC CCGGATGCTG AAGGCGCTGG CCCTGCACCT GGGCGCACAC
AAACAGGCGC TCTATGACCT GTCCTTCGCC ACCGGCGCCA CCCAGGCCGA CCACCTGATC
GACATCGACG GCGGCATCGG CACGGTGTTC GTCTTTGCCT CCAAGGGGCG GCGGGAGATG
CCCGATGCCC ATGTCTATCT CGACGGCGAG GTCGAACAGC TGTCCCGCAC CGGCACCTTC
CTGGGCCAGC ATATCGCAAC CCCGCTGCAA GGCGTCGCGG TGCATATCAA CGCCTTCAAC
TTCCCGGTCT GGGGCATGCT GGAGAAGCTC GCCCCGACCC TGCTGGCCGG GATGCCCGCG
ATCGTCAAAC CGGCCACCGC CAGCTGCTAT GTCACCGAAA AGGCGGTGCG GATCATCCTC
GACAGCGGCA TCCTGCCCGC CGGCGCGCTG CAGCTTGTCA CCGGCGGGCT GGGCGACATG
CTCGACCGGC TGACCTGCCA GGACGTGGTC AGCTTCACCG GCTCCGCCGA CACCGCGCTG
CGCCTGCGCG CGGCCCCTCA CCTGCTGCGC AACGCGGTCC GCTTCGTGGC AGAGCAGGAC
AGCCTCAACG CCTCGATCCT CGGCCCCGAC GCGGTGCCCG GCACGCCGGA ATTCGATCTC
TTCATCCGGG AGGTGGCGCG GGAAATGACC GCCAAGGCGG GCCAGAAATG CACCGCCATC
CGCCGCATCC TCGCCCCGCA GGCCCAGGTC GACGGGGTGA TCGCCGCCCT GGGCGCCCGG
CTGGCCAAGA CGGTGATCGG CGACCCGCGC GACACCGCCA CCACCATGGG CGCCCTGGTC
TCCAACGGCC AGAAACGCGA CGTACTGGCG AAGGCCCGCG TCATCGCCAC CGAGGCCGAG
CGTGTCTTCG GCGACCCGGA GGCGTTCACG GTCCACGGCG CCGATGCCCG AACGGGCGCG
TTCCTGCCAC CGATGCTGTT ACACTGCGCC GATCCCGATG CCGCGCAGCG CCTGCACGAC
ACCGAGGCCT TCGGGCCGGT CTCGACGGTC ATGGGCTACC GCGACCTGGA TCATGCCGTG
GCCCTGGTCA ATCGCGGGGC AGGCTCCCTG GTGGCCTCGC TGATCACCCA TGACCCGGAG
GTCGCGCGCC AGGTCGCCCT GGGCGCGGGC GCCTTCCACG GGCGGCTCTA TATCAACGAT
CGCGACAGCA TGGGCGAGGC CACCGGCCAC GGCGCCCCCC TGCCCCACAT GATCCATGGC
GGCCCCGGAC GTGCCGGCGG CGGCGAAGAA CTGGGCGGCG TGCGCGGGGT GATGCACTAC
ATGCAGCGCA CCGCGATCCA GGGCAGCCCG GACATGCTGA CCGCGATCGG GGGCAAATGG
GTGCCCGGCG CGACCGAAAC CCCGGCCCCG GCCCATCCCT TCACCCGCGG CTTCGACGCG
CTGCGGATCG GCGAGACCCT GCACACCCCG GCGCGACAGG TCACCCTGGC CGATATCGAG
CATTTCGCCG CGTTCACCGG CGACACCTTC TATGCCCATA TGGATGACGC GGCGGCGGCG
CGAAACCCGT TCTTCCCCGG GCGGGTGGCC CATGGCTACC TGCTGCTGAG CTTTGCCGCC
GGGCTGTTCG TGGATCCCGA CGAAGGCCCG GTTCTGGCCA ATACCGGCCT CGACAGCCTG
CGCTTTCTCA AGCCGGTCGC GCCGGGCGAC AGCCTCAAGG CCCGCCTGAC GGTCAAGCAC
AAGACCCCGC GCAACGACGC ATATGGCGAG GTGCGTTGGC ATGTGAGCCT GACCAACCAG
GAGGACGACC TGGTGGCGGA GTACGAGTTG CTCACCATGA TCGCCTATGC CGCCTAG
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| Protein sequence | MSLLDVQSFA AGHWIAPDAD ARMIAHAVTG APLARAGNGA LDVQAMLDYA RDTGGPALRA
LTFHDRARML KALALHLGAH KQALYDLSFA TGATQADHLI DIDGGIGTVF VFASKGRREM
PDAHVYLDGE VEQLSRTGTF LGQHIATPLQ GVAVHINAFN FPVWGMLEKL APTLLAGMPA
IVKPATASCY VTEKAVRIIL DSGILPAGAL QLVTGGLGDM LDRLTCQDVV SFTGSADTAL
RLRAAPHLLR NAVRFVAEQD SLNASILGPD AVPGTPEFDL FIREVAREMT AKAGQKCTAI
RRILAPQAQV DGVIAALGAR LAKTVIGDPR DTATTMGALV SNGQKRDVLA KARVIATEAE
RVFGDPEAFT VHGADARTGA FLPPMLLHCA DPDAAQRLHD TEAFGPVSTV MGYRDLDHAV
ALVNRGAGSL VASLITHDPE VARQVALGAG AFHGRLYIND RDSMGEATGH GAPLPHMIHG
GPGRAGGGEE LGGVRGVMHY MQRTAIQGSP DMLTAIGGKW VPGATETPAP AHPFTRGFDA
LRIGETLHTP ARQVTLADIE HFAAFTGDTF YAHMDDAAAA RNPFFPGRVA HGYLLLSFAA
GLFVDPDEGP VLANTGLDSL RFLKPVAPGD SLKARLTVKH KTPRNDAYGE VRWHVSLTNQ
EDDLVAEYEL LTMIAYAA
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